A 2 gigabyte map is a very big one. Maybe it needs resampling or cropping down 
to something in the megabyte range. 
Best wishes, Jon Cooper.
jon.b.coo...@protonmail.com

Sent from Proton Mail Android


-------- Original Message --------
On 07/08/2024 09:24, Klemens Wild <klemens.w...@bzh.uni-heidelberg.de> wrote:

>  Dear community
>  
>  small problem running phenix.real_space_refine on a high resolution map
>  via GUI (2.4 A, 2.05 GB) on a MacBook Pro 32 GB M1 ... Never encountered
>  this before, but always used smaller maps:
>  
>  Routine starts and job hangs upon extracting box (see attachment).
>  Separate job on map runs when I do wrapping (thought it might be this),
>  however, when I feed the GUI with this output, again nothing. Not sure
>  what the problem is (no log file indication or error message): some grid
>  things, unit cell issues, map too big?
>  
>  Some input would be helpful, as I am stuck ...
>  
>  Thx
>  
>  Klemens
>  
>  
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