Dear Marco,
Please don't you mind to export your refmac5 job and send it to me so I
can have a look? I will keep it confidential. In the following coot job,
do you open the structure model in PDB or mmCIF format?
You can also export a PDB or a mmCIF file from the refmac5 job -
similarly as an MTZ file. In the left panel where jobs are listed, click
on the little arrow on the left of the refmac5 job. A list of files
appears, you can right-click on a PDB or a mmCIF file and export it.
Cheers,
Martin
On 31/05/2024 07:47, Paul Emsley wrote:
On 31/05/2024 07:44, Marco Bravo wrote:
Has anyone had the issue where they run coot from ccp4i2 on say a
refmac5 job and when coot opens the model or even the map do not show
up? its just empty? Does anyone know how to fix this and display the
model and map? I like ccp4i2 so far more than ccp4 and I did not have
this issue with ccp4 but of course I had to manually load the model
and map. I can see that I can export the mtz from refmac5 jobs, but I
don't know where the pdb file is for the refmac 5 jobs?
What does it say in the log file?
Paul.
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