You could search for peaks of decreasing height by stepping back through through alphabet with your text searches. Of course, peakmax will do a good job of finding them anyway.
Best wishes, Jon Cooper. jon.b.coo...@protonmail.com Sent from Proton Mail mobile -------- Original Message -------- On 18 Feb 2024, 17:35, Jon Cooper wrote: > I think we used to use mapsig for printing map sections with single > characters to show peak height. You could set it so that low or no density > was just a dot and higher values were 0...9 ... A... Z ... * #, etc. up to > the maximum or maybe it was another one of Ian's programs. It made peak > searching with a text editor pretty easy just by searching for the characters > corressponding to the high values. I don't know if that's any use. > > Best wishes, Jon Cooper. jon.b.coo...@protonmail.com > > Sent from Proton Mail mobile > > -------- Original Message -------- > On 18 Feb 2024, 03:29, Bernhard Rupp wrote: > >> Der CCP4 Experts & Developers, >> >> I am exercising in CCP4i (Windows, 8.0.017) some old-fashioned native >> Patterson maps for NCS analysis, using ‘patterson’ of FFT which produces the >> *.map (dump) file and 3 Harker *.plt files. >> >> Unfortunately, epic fail on the display of the results. >> >> The ghostview (cf. image) I cannot install (some dll error) and it also >> seems deprecated. >> >> As a workaround I use pltdev to generate a *.ps file and distil it into a >> pdf and then display. Works, but ghostly 20th century.... >> >> ...or I display the map directly in Coot and eyeball the >> peaks....surprisingly neat and educational. >> >> Q1: Do we have a direct way in the GUI to convert/display these CCP4 plt >> files? >> >> I failed adding as PSviewer "C:\Program Files (x86)\Adobe\Acrobat >> DC\Acrobat\acrodist.exe" in the interface configuration (problem maybe the >> blanks). >> >> But the entry in the Interface Configuration (config.def) seems sensibly >> quoted: >> >> PS_PREVIEW_NAME,4 _text acrodist.exe >> >> PS_PREVIEW_COM,4 _text "C:\Program Files (x86)\Adobe\Acrobat >> DC\Acrobat\acrodist.exe" >> >> Q2: how do I properly enter the path to the distiller in the interface >> configuration? >> >> Mapslicer is also uncooperative (cf. img). >> >> The Interface Configuration entry informs me that “ccp4mapwish [file join >> [GetEnvPath CCP4I_TOP] bin mapslicer.tcl]”. >> >> Q3: How should I fix this (I swear I did not wish with the installation)? >> >> In search of a more modern approach to this map analysis I also tried CCP4i2 >> and Phenix, but there was no task like >> >> “Make a native Patterson and show me the *&%# map” to be found. >> >> Q4: would this be a useful task to provide? >> >> (a selfrotation task exists in ccp4i2 via molrep, and there, PS viewing >> works just fine). >> >> Cheers, BR >> >> ------------------------------------------------------ >> >> Bernhard Rupp, Psilosopher >> >> https://psilosophy.org/ >> >> https://www.hofkristallamt.org/ >> >> b...@hofkristallamt.org >> >> +1 925 209 7429 >> >> +43 676 571 0536 >> >> ------------------------------------------------------ >> >> All models are wrong but some are useful. >> >> ------------------------------------------------------ >> >> --------------------------------------------------------------- >> >> To unsubscribe from the CCP4BB list, click the following link: >> https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 >> >> --------------------------------------------------------------- >> >> To unsubscribe from the CCP4BB list, click the following link: >> https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
