Hi, The current policy of the PDB is that you can deposit a re-refinement of a structure deposited by someone else only if you publish a new paper about it, so that there is a citation associated with the structure. Of course, echoing Eleanor, if you find an issue with someone else’s structure the most collegiate thing to do is to inform the authors and attempt to work with them to fix up the problem.
Best wishes, Randy > On 27 Jan 2024, at 07:00, Eleanor Dodson > <0000176a9d5ebad7-dmarc-requ...@jiscmail.ac.uk> wrote: > > Did you make the original deposition ? If so the pdb accepts re-depositions... > > If it was done by someone else I guess the courteous thing is to notify them > and maybe talk to the pdb- redo team? > Cheers Eleanor > > On Sat, 27 Jan 2024 at 01:53, Lucas Souza <lucas.santoso...@outlook.com> > wrote: > Dear all, > > After auditing and reprocessing a deposited structure with clear processing > mistakes (missing/wrong residues and ligands with evident density) prior to > some analysis that are going to be published, what should be done? Re-deposit > the structure with a "reprocess" flag? Reopen the PDB deposition and update > the files? Or simply state in the publication that the data was reprocessed? > > I'm curious if there's a consensus on handling situations of this nature. > > Cheers, > Lucas > ######################################################################## > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 > > This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing > list hosted by www.jiscmail.ac.uk, terms & conditions are available at > https://www.jiscmail.ac.uk/policyandsecurity/ > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 ----- Randy J. Read Department of Haematology, University of Cambridge Cambridge Institute for Medical Research Tel: +44 1223 336500 The Keith Peters Building Hills Road E-mail: rj...@cam.ac.uk Cambridge CB2 0XY, U.K. www-structmed.cimr.cam.ac.uk ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
