PDBj has a nice web-based mmCIF editor that
can help you edit mmCIF an validate the
data entered.
See https://pdbj.org/cif-editor/
Regards,
Mitch
Quoting Harry Powell <0000193323b1e616-dmarc-requ...@jiscmail.ac.uk>:
Hi
There is no particular special editor from PDB (or from anywhere
else, as far as I know) for doing this - mmCIF is basically a simple
text file with a defined set of contents. It frees you from the
tyranny of fixed-width columns that your have in the historic PDB
file.
I’d just use whatever text editor you have on your system - so on
LInux or Mac, something like vim, emacs, nano, on Windows Notepad.
No need for anything special.
But I’d also be wary about screwing up the file completely with your
edits - it’s easy to turn a compliant file into something invalid.
Harry
On 30 Aug 2023, at 14:05, Krishnan Raman <rkrish...@biocryst.com> wrote:
How do I edit mmcif files from pdb? Is there a editor for download
from pdb website? Thanks krish
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