Mirek,

Yes, this is a known issue (I read about it previously either here or on
the Coot webpage, I can't recall which).

The only "workaround" is to check the "keep delete active" box before you
begin deleting. It took me a bit to realize this, so I'll share: The window
is still open and can be accessed by right clicking on the XQuartz app in
the menu bar and selecting the coot window.

Best,

Nick Clark

On Wed, Jan 25, 2023 at 3:40 PM Cygler, Miroslaw <miroslaw.cyg...@usask.ca>
wrote:

> Hi,
> I just upgrade my Mac to Ventura v13.2 from v12.6.3 and run into issue
> with Coot. When I use the delete command it causes the main Coot window
> disappearing while other Coot windows stay open. Has anyone had this issue?
> Is there a way around it? No such problem on v12.6.3.
> Best,
>
> Mirek
>
>
>
>
>
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-- 
Nicholas D. Clark (He/Him)
PhD Candidate
Malkowski Lab
University at Buffalo
Department of Structural Biology
Jacob's School of Medicine & Biomedical Sciences
955 Main Street, RM 5130
Buffalo, NY 14203

Cell: 716-830-1908

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