On 11/07/2022 12:36, Colin Levy wrote:
Hi All,

Is there an equivalent functionality to Phenix.refine Sequence check in CCP4?  A quick alignment tool of model sequence from pdb to the provided sequence?


It seems to me there are a number of ways that one can check a model (and map) against a sequence. One ways is by Coot. If you have your desired/expected sequence as a pir file:


Validate -> Alignment vs PIR...


Paul.


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