Re: [ccp4bb] Generate adx code

[Kay Diederichs]

Hi Doo Nam,




If you change the code
     character :: string*132,frmnam*103,form*6='(i0.0)'
to
     character :: string*550,frmnam*512,form*6='(i0.0)'
then I'd expect it to work for your case, and for even longer paths.

The workaround is to use a symlink: change XDS.INP to have
NAME_TEMPLATE_OF_DATA_FRAMES=mylonglink/093757merged_????.img
and


Hope this helps!

Kay


Am 22.07.21 um 21:34 schrieb Doo Nam Kim:

the reason for the failure is that your frame names are longer than the program expects: the frame names should not have more than 103 characters, but your names are longer. This results in truncation. ln -s /gpustorage/DN/microED/catalase/by_AutoMicroED/output/20210721_12-22_15/093757merged/img mylonglink

Hi Kay,

Thank you for your help.
It is my honor to get support from the original developer.

Here I attach 3 screenshots (please see filenames of these screenshots).


When I used my compiled generate_adx, newly generated files are

093757merged_5
093757merged_6
093757merged_7
093757merged_8
093757merged_9
and
093757merged_*
(I don't mean asterisk here to represent multiple files. Literally, the 
filename is 093757merged_* that has a similar file size as of 093757merged_9)


When I used your compiled generate_adx (that you provided kindly via personal 
email), I don't see newly generated files.

Best,
Doo Nam

--
Kay Diederichs                http://strucbio.biologie.uni-konstanz.de
email: kay.diederi...@uni-konstanz.de             Tel +49 7531 88 4049
Fachbereich Biologie, Universität Konstanz, Box M647, D-78457 Konstanz

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