....yes Eleanor is right. command line still works.:-) fft is also in 7.1 distribution.
On Tue, Jul 7, 2020 at 3:43 PM Eleanor Dodson <eleanor.dod...@york.ac.uk> wrote: > Oh Lau - how I miss that list! > But if you just run fft online it is still distributed..wombat:Downloads > eleanor$ > > fft hklin .... mapout .... > > LABIN FP= and so on.. > > > On Tue, 7 Jul 2020 at 14:22, Christian Roth <christianroth...@gmail.com> > wrote: > >> Hi Kelvin, >> well fft as single program is kind of not longer supported as is not >> ccp4i. In i2 internally, as well in communication with mg or coot, >> everything is done using map coefficients. >> Their are two options: >> First via i2: Use the unusual map coefficients Task and choose not to >> compare maps, but to generate the map coefficients plus a map (button is in >> Advanced tab) the standard grid parameters can be changed, but are actually >> optimized already. >> Second just save the map out of Coot (Export map) >> >> To avoid redundancy, the old fft task was discontinued. i2 works with >> coefficients, which generates smaller files and Coot provides all the >> functions to generate the map and is its own gui. >> >> Hope that explains a bit why things are how they are now. >> >> Cheers >> Christian >> >> On Tue, Jul 7, 2020 at 1:56 PM Lau Kelvin <kelvin....@epfl.ch> wrote: >> >>> Hi Christian, >>> >>> >>> >>> I was in particular looking for the fft program (I couldn’t find that >>> using the method you described) just to convert an mtz into a .map. Before >>> in version 7.0 I could just browse all programs, now it seems like I cannot >>> do that (other than using the filter, and some seem to be missing) >>> >>> >>> >>> At the end I just used mtz2map in phenix. >>> >>> >>> >>> -- >>> Kelvin Lau >>> >>> https://people.epfl.ch/kelvin.lau >>> >>> >>> Protein production and structure core facility - PTPSP >>> EPFL SV PTECH PTPSP >>> AI 2146 (Bâtiment AI) >>> Station 19 >>> CH-1015 Lausanne >>> Switzerland >>> Email: kelvin....@epfl.ch <kelvin....@epfl.ch> >>> Phone: +41 21 69 30267 <+41%2021%2069%C2%A030267> >>> >>> If unreachable: +41 21 69 34494 <+41%2021%2069%C2%A030267> >>> >>> >>> >>> >>> >>> On 06.07.20, 13:34, "Christian Roth" <christianroth...@gmail.com> wrote: >>> >>> >>> >>> Hi Kelvin, >>> >>> not quite sure if I understand you correctly, but if you press the Task >>> Manager button you get on the right sight a list of topics (import data, >>> Molecular Replacemnt etc.) each point can be open up like a file tree to >>> see all programs or pipelines available. You can search with the search >>> field (Filter) on top for specific program names. >>> >>> Does that help? >>> >>> >>> >>> Cheers >>> >>> Christian >>> >>> >>> >>> On Mon, Jul 6, 2020 at 1:15 PM Lau Kelvin <kelvin....@epfl.ch> wrote: >>> >>> Hello, >>> >>> >>> >>> I am looking for a way to find the list of programs accessible using the >>> new 7.1 CCP4I2 interface? Is this still possible or do I have to revert >>> back to version 7.0? >>> >>> >>> >>> Best regards, >>> >>> >>> >>> Kelvin >>> >>> >>> >>> -- >>> Kelvin Lau >>> >>> https://people.epfl.ch/kelvin.lau >>> >>> >>> Protein production and structure core facility - PTPSP >>> EPFL SV PTECH PTPSP >>> AI 2146 (Bâtiment AI) >>> Station 19 >>> CH-1015 Lausanne >>> Switzerland >>> Email: kelvin....@epfl.ch <kelvin....@epfl.ch> >>> Phone: +41 21 69 30267 <+41%2021%2069%C2%A030267> >>> >>> If unreachable: +41 21 69 34494 <+41%2021%2069%C2%A030267> >>> >>> >>> >>> >>> ------------------------------ >>> >>> To unsubscribe from the CCP4BB list, click the following link: >>> https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 >>> >>> >> ------------------------------ >> >> To unsubscribe from the CCP4BB list, click the following link: >> https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 >> > ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
