Why not just use QTMG rather than Pymol? This is, after all, the _CCP4_ bulletin board…
H > On 14 Jun 2020, at 23:56, Javier Gonzalez <bio...@gmail.com> wrote: > > Thank you so much Vijaykumar and Kevin, it worked smoothly! > Best wishes, > Javier > > On Sun, Jun 14, 2020 at 5:04 PM Kevin Jin <kevin...@gmail.com> wrote: > My OS Version: Catalina 10.15.5; > > brew install brewsci/bio/pymol > > To verify, I just installed Pymol using brew 2 minutes ago. It works. > > On Sat, Jun 13, 2020 at 4:45 PM Javier Gonzalez <bio...@gmail.com> wrote: > Hello, > I'm attempting to build pymol on a laptop running MacOS Catalina 10.15.5, > Processor 2.8GHz Quad-Core Intel i7, Graphics Intel Iris Pro 1536 MB > I downloaded the latest version of Xcode 11.1 > > I tried from Fink (fink install pymol-py27) and Macports (sudo port install > pymol), as indicated here: https://pymolwiki.org/index.php/MAC_Install > > Both scripts run to download all dependencies but at the end fail with > different messages (see below). Any ideas? Is it doable or am I just > following outdated instructions? > Thanks in advance! > Javier > > Fink: fails at compiling term-readkey-pm5184-2.37-1 > ------------------------------------------------------------------------------------------------------------- > ------------------------------------------------------------------------------------------------------------- > Failed: phase compiling: term-readkey-pm5184-2.37-1 failed > > Before reporting any errors, please run "fink selfupdate" and try again. > Also try using "fink configure" to set your maximum build jobs to 1 and > attempt to build the package again. > If you continue to have issues, please check to see if the FAQ on Fink's > website solves the problem. If not, ask on one (not both, please) of > these mailing lists: > > The Fink Users List <fink-us...@lists.sourceforge.net> > The Fink Beginners List <fink-beginn...@lists.sourceforge.net>, > > with a carbon copy to the maintainer: > > Christian Schaffner <chri...@users.sourceforge.net> > > Note that this is preferable to emailing just the maintainer directly, > since most fink package maintainers do not have access to all possible > hardware and software configurations. > > Please try to include the complete error message in your report. This > generally consists of a compiler line starting with e.g. "gcc" or "g++" > followed by the actual error output from the compiler. > > Also include the following system information: > Package manager version: 0.45.1 > Distribution version: selfupdate-rsync Fri Jun 12 21:49:17 2020, 10.15, x86_64 > Trees: local/main stable/main > Xcode.app: 11.5 > Xcode command-line tools: 11.5.0.0.1.1588476445 > Max. Fink build jobs: 8 > ------------------------------------------------------------------------------------------------------------- > ------------------------------------------------------------------------------------------------------------- > Macports: apparently there is an issue with py38-pyqt5 > ---> Computing dependencies for pymol > The following dependencies will be installed: py38-pyqt5 > Continue? [Y/n]: > ---> Fetching archive for py38-pyqt5 > ---> Attempting to fetch py38-pyqt5-5.14.2_0.darwin_19.x86_64.tbz2 from > https://packages.macports.org/py38-pyqt5 > ---> Attempting to fetch py38-pyqt5-5.14.2_0.darwin_19.x86_64.tbz2 from > http://aus.us.packages.macports.org/macports/packages/py38-pyqt5 > ---> Attempting to fetch py38-pyqt5-5.14.2_0.darwin_19.x86_64.tbz2 from > https://ywg.ca.packages.macports.org/mirror/macports/packages/py38-pyqt5 > ---> Building py38-pyqt5 > Error: Failed to build py38-pyqt5: command execution failed > Error: See > /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_python_py-pyqt5/py38-pyqt5/main.log > for details. > Error: Follow https://guide.macports.org/#project.tickets to report a bug. > Error: Processing of port pymol failed > ------------------------------------------------------------------------------------------------------------- > ------------------------------------------------------------------------------------------------------------- > -- > Dr. Javier M. González > Instituto de Bionanotecnología del NOA (INBIONATEC-CONICET) > Universidad Nacional de Santiago del Estero (UNSE) > RN9, Km 1125. Villa El Zanjón. (G4206XCP) > Santiago del Estero. Argentina > Tel: +54-(0385)-4238352 > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1 > > > > -- > Kevin Jin > > Sharing knowledge each other is always very joyful...... > > Website: http://www.jinkai.org/ > > > > -- > Dr. Javier M. González > Instituto de Bionanotecnología del NOA (INBIONATEC-CONICET) > Universidad Nacional de Santiago del Estero (UNSE) > RN9, Km 1125. Villa El Zanjón. (G4206XCP) > Santiago del Estero. Argentina > Tel: +54-(0385)-4238352 > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1 > ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
