Dear Stuart, yes, you are right. I also submitted successfully a first Phaser job to our number cruncher. Thanks a lot for this fast work around.
To ask for the SSH port setting within the final user/password window would be extremely helpful to avoid a fixed port setting. An egoistic dream on my side, but I support several groups with different SSH ports by ONE CCP4 installation ... ;-) Kind regards and thanks again, Michael Am 09.06.20 um 10:49 schrieb Stuart McNicholas: > Apologies, it did work for me, I think. I just hadn't set my username. > > On Tue, 9 Jun 2020 at 09:45, Stuart McNicholas > <stuart.mcnicho...@york.ac.uk <mailto:stuart.mcnicho...@york.ac.uk>> > wrote: > > My idea seemingly hasn't worked for me. I'll keep trying. > > On Tue, 9 Jun 2020 at 09:17, Stuart McNicholas > <stuart.mcnicho...@york.ac.uk > <mailto:stuart.mcnicho...@york.ac.uk>> wrote: > > Dear Michael, > I think that the port number is hardwired in CCP4i2 on > line 439 of $CCP4/share/ccp4i2/core/CCP4JobServer.py > > transport = paramiko.Transport((sP.machine, 22)) > > also there are various calls to the "paramiko" library which > handles ssh, which do not pass a port number and so default to 22. > > This is all bad. > > I have attached a replacement for this file. Could you try > making a backup of the above file and copying the attached > file in its place. > I have put a constant for the port number in the line > > PARAMIKO_PORT=22 > > near the top of the file. Then change this port number for > what is suitable for you. > > If this works, then I will make the port number an option in > the program. If not, then I will try something else. > > > Best wishes, > Stuart McNicholas > > On Mon, 8 Jun 2020 at 17:40, Michael Weyand > <michael.wey...@uni-bayreuth.de > <mailto:michael.wey...@uni-bayreuth.de>> wrote: > > Dear CCP4I2 experts, > > I'm trying to submit remote jobs via SSH within CCP4i2. > Unfortunately, > we use a non standard SSH port. > So far, I'm not able to add any option within the CCP4I2 > interface. For > job submission, I need something to do like > > 'ssh -p XXXXX -Y ..... ccp4i-specific-command ...'. > > Is there any chance to enter this '-p' SSH option within > CCP4i2? I tried > already to define a "ssh command" via "Preferences". > But so far without any success. > > I'm also wondering why there is a sshkey file option. If > an user already > uses a ssh-key for a client/server connection, why is > necessary to > re-input the key file again? > Any ssh between client and server should work from scratch ... > > Any hints are highly appreciated, > Michael > > > ######################################################################## > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1 > > This message was issued to members of > www.jiscmail.ac.uk/CCP4BB > <http://www.jiscmail.ac.uk/CCP4BB>, a mailing list hosted > by www.jiscmail.ac.uk <http://www.jiscmail.ac.uk>, terms & > conditions are available at > https://www.jiscmail.ac.uk/policyandsecurity/ > ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
