Great! It now works as expected. On Nov 14, 2019, at 9:16 AM, Stuart McNicholas <stuart.mcnicho...@york.ac.uk<mailto:stuart.mcnicho...@york.ac.uk>> wrote:
Dear Jerome, I've just updated the Mac 2.10.11 package at http://www.ccp4.ac.uk/MG/download-2.10.11/ Rendering now works in this version for me. You will have to delete old version and download again. Stuart On Thu, 14 Nov 2019 at 13:06, Jerome Nwachukwu <jnwac...@scripps.edu<mailto:jnwac...@scripps.edu>> wrote: Ok. Sent from my iPhone On Nov 14, 2019, at 5:31 AM, Stuart McNicholas <stuart.mcnicho...@york.ac.uk<mailto:stuart.mcnicho...@york.ac.uk>> wrote: The "good" news is that I just tried rendering with a newly installed 2.10.11 and that fails to save a file. I might be getting somewhere. On Thu, 14 Nov 2019 at 10:27, Stuart McNicholas <stuart.mcnicho...@york.ac.uk<mailto:stuart.mcnicho...@york.ac.uk>> wrote: And, oh dear, I meant "-noredirect", not "-norestore". Not that this should cause the trouble you saw. On Thu, 14 Nov 2019 at 10:23, Stuart McNicholas <stuart.mcnicho...@york.ac.uk<mailto:stuart.mcnicho...@york.ac.uk>> wrote: Dear Jerome, Oh dear, that all looks horrible and I have no idea what it means, but it's possibly a Catalina security thing or something. I've only tried 2.10.10 myself, I'll try installing 2.10.11 now. (I know you have done both). Stuart On Wed, 13 Nov 2019 at 19:34, Jerome Nwachukwu <jnwac...@scripps.edu<mailto:jnwac...@scripps.edu>> wrote: When I opened Terminal, I got the following message: The default interactive shell is now zsh. To update your account to use zsh, please run `chsh -s /bin/zsh`. For more details, please visit https://support.apple.com/kb/HT208050. …and after running the command: "/Applications/QtMG.app/Contents/MacOS/QtMG -norestore" Using CCP4 in /Applications/QtMG.app/Contents/MacOS/../ccp4mg/bin/../CCP4 Using /Applications/QtMG.app/Contents/ccp4mg/../Frameworks /Applications/QtMG.app/Contents/MacOS/../ccp4mg/bin/../CCP4/lib/data/syminfo.lib CCP4 is /Applications/QtMG.app/Contents/MacOS/../ccp4mg/bin/../CCP4 Reading status file from version 2.10.11 [2, 10, 11] Create sequence prefs Applying command line.. calculateShadowExtents ['/Applications/QtMG.app/Contents/ccp4mg/qtgui/main.py', '-norestore'] UpdateRecents: about to call HIS_XPC_GetApplicationPolicyForURLs with seed 533934 UpdateRecents: received results from HIS_XPC_GetApplicationPolicyForURLs UpdateRecents: about to parse results from HIS UpdateRecents: about to update menu item state UpdateRecents: disabling ScreenTime for item 2 UpdateRecents: disabling ScreenTime for item 3 UpdateRecents: disabling ScreenTime for item 4 UpdateRecents: disabling ScreenTime for item 5 UpdateRecents: disabling ScreenTime for item 6 UpdateRecents: disabling ScreenTime for item 7 UpdateRecents: disabling ScreenTime for item 8 UpdateRecents: disabling ScreenTime for item 9 UpdateRecents: disabling ScreenTime for item 10 UpdateRecents: disabling ScreenTime for item 11 UpdateRecents: disabling ScreenTime for item 12 UpdateRecents: disabling ScreenTime for item 13 UpdateRecents: disabling ScreenTime for item 14 UpdateRecents: disabling ScreenTime for item 15 UpdateRecents: disabling ScreenTime for item 16 UpdateRecents: disabling ScreenTime for item 17 UpdateRecents: disabling ScreenTime for item 18 UpdateRecents: disabling ScreenTime for item 19 UpdateRecents: disabling ScreenTime for item 20 UpdateRecents: disabling ScreenTime for item 21 And then it appears frozen… On Nov 13, 2019, at 10:58 AM, Stuart McNicholas <stuart.mcnicho...@york.ac.uk<mailto:stuart.mcnicho...@york.ac.uk>> wrote: Then I think my next suggestion is to run the following command in a Terminal window and copy the output into an email to see if we can understand why the image files are not being written when you attempt to render. /Applications/QtMG.app/Contents/MacOS/QtMG -norestore Stuart On Wed, 13 Nov 2019 at 14:46, Jerome Nwachukwu <jnwac...@scripps.edu<mailto:jnwac...@scripps.edu>> wrote: Hi Stuart, I am using a 2017 Mac book pro with Radeon Pro 560 and Intel HD Graphics 630. The initial CCP4MG (installed before I upgraded to Catalina) had this problem, so I updated CCP4MG to v2.10.11 on Catalina, which did not fix the problem. On Nov 13, 2019, at 7:13 AM, Stuart McNicholas <000019a0c5f649e5-dmarc-requ...@jiscmail.ac.uk<mailto:000019a0c5f649e5-dmarc-requ...@jiscmail.ac.uk>> wrote: Dear Jerome, Jon Agirre has pointed to me out you wrote "render" not "screenshot", which will be independent of graphics chip. Thank you, Jon! However, I just tried render and that seems to work as well. Did you install CCP4MG before or after upgrading to Catalina? Or was this a new computer onto which you've installed CCP4MG? I guess write permissions may vary in the various cases. Best wishes, Stuart On Wed, 13 Nov 2019 at 12:06, Jon Agirre <jon.agi...@york.ac.uk<mailto:jon.agi...@york.ac.uk>> wrote: He mentions 'render' - perhaps he means he's used the Render menu option? On Wed, 13 Nov 2019 at 11:58, Stuart McNicholas <000019a0c5f649e5-dmarc-requ...@jiscmail.ac.uk<mailto:000019a0c5f649e5-dmarc-requ...@jiscmail.ac.uk>> wrote: Dear Jerome, On my 13in Mid 2014 MacBook Pro with Intel Iris Graphics now running Catalina (10.15.1), CCP4MG screenshots seem to work fine. What Computer/Graphics chip are you using? I'll have to try upgrading a different computer to see if I can reproduce the problem. Best wishes, Stuart On Wed, 13 Nov 2019 at 08:56, Stuart McNicholas <stuart.mcnicho...@york.ac.uk<mailto:stuart.mcnicho...@york.ac.uk>> wrote: Dear Jerome, It is entirely possible that this is a Catalina problem. I do not have a Catalina machine and hence have not tested CCP4MG on Catalina. I will install Catalina on one of my computers right away and see if I get the same problem. It may also depend on what graphics chip you have in your computer. We'll determine if that is important once I have upgraded. Best wishes, Stuart On Tue, 12 Nov 2019 at 20:44, Jerome Nwachukwu <jnwac...@scripps.edu<mailto:jnwac...@scripps.edu>> wrote: Hi all, When I render images and try to save them, CCP4MG writes a status file, but does not save any image files. I have tried the two latest versions of CCP4MG. Could it be because I’m using macOS Catalina (version 10.15.1) ? ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1 ________________________________ To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1 -- Dr Jon Agirre Royal Society University Research Fellow York Structural Biology Laboratory / Department of Chemistry University of York, Heslington, YO10 5DD, York, UK http://www.york.ac.uk/chemistry/research/ysbl/people/staff/jagirre/ Office: /B/K/065 Phone: +44 (0) 1904 32 8252 Twitter: @glycojones ________________________________ To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1 ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1
