PhD Position in Structural Parasitology at IOCB, Prague

Job description

A PhD position is open in Dr Sebastian Zoll‘s structural biology group at the 
Institute of Organic Chemistry and Biochemistry (IOCB) in Prague. The group is 
interested in understanding the structural basis of interaction between surface 
proteins of eukaryotic parasites and human host factors to provide a foundation 
for the development of novel therapeutic strategies against neglected tropical 
diseases. The successful candidate will be using an integrated structural 
biology approach including X-ray crystallography, small angle X-ray scattering 
as well as single particle Cryo-EM together with a wide range of biophysical 
techniques for characterisation of protein-protein/ligand interactions. The 
position will also include training in the growing field of recombinant 
antibody and nanobody technology which the candidate will be applying in 
structural studies as well as in the development of therapeutics. The project 
is supported by a multidisciplinary network of international collaborators and 
provides excellent opportunities to receive additional training in foreign host 
institutions.

The institute and the city

The Institute of Organic Chemistry and Biochemistry (IOCB) in Prague is the 
leading scientific research institution in the Czech Republic providing a 
dynamic, international environment that brings together researchers from 
various fields such as structural biology, molecular biology, medicinal and 
computational chemistry. 

IOCB is situated near the city centre in a vibrating, historical quarter of 
Prague boasting beautiful architecture and a rich array of public amenities 
such as cafés, pubs, parks and grocery stores. Transport links by metro and 
tram are excellent with short distances to both airport as well as old town and 
Letna park with its stunning views over the Vltava river. 

Due to its long-standing history in applied science and strong ties with the 
pharmaceutical industry, IOCB enjoys an excellent funding situation and offers 
access to facilities for all modern structural and biophysical methods. 
Bacterial and eukaryotic protein expression platforms are available as well as 
Mass Spectrometry and NMR facilities and a computing cluster for data 
processing, structure determination and Rosetta-based protein modelling. A 
state-of-the-art crystallisation facility contains robotics for 96-well-plate 
crystallisation and liquid handling, a Rigaku imaging hotel and an X-ray 
generator equipped with a Pilatus 300K detector. For high-resolution data 
collection there are also regular trips to European synchrotrons. Furthermore, 
a 200 keV cryo-electron microscope will become operational within the next 2 
years at IOCB. In the meanwhile IOCB researchers enjoy privileged access to the 
EM facilities (screening microscopes and Titan Krios) at CEITEC. 

Requirements 

We are looking for candidates with an M.Sc. in biology, biochemistry or a 
related discipline and a strong interest in structural biology. The successful 
candidate must be willing to work as part of a team and have the motivation and 
commitment to design experiments and interpret results independently. 
Experience in structural biology techniques is not required but familiarity 
with recombinant protein expression and protein purification will be a plus. 
Good oral and written communication skills in English are a prerequisite.

How to apply?

Please send a short motivation statement (max. 500 words), a copy of your 
research thesis and M.Sc. certificate, a copy of your CV and contact 
information for two references to [email protected]

Feel free to contact Sebastian for informal enquiries.

Dr Sebastian Zoll
Junior Group Leader
Institute of Organic Chemistry and Biochemistry
Czech Academy of Sciences
Flemingovo namesti 542/2, 166 10 Prague 6
Czech Republic
Phone: +420 220 183 591
Email: [email protected]
Facebook: https://www.facebook.com/IOCBPrague

Recent relevant publications:

Zoll S, Lane-Serff H, Mehmood S, Schneider J, Robinson CV, Carrington M, 
Higgins MK (2018) The structure of serum resistance-associated protein and its 
implications for human African trypanosomiasis. Nature Microbiology 3: 295-301
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