Well I think I recall one instance where it worked for me the way you describe. I think there was either a stray residue atom somewhere or a numbering not quite right. Could it be that this happens for you after autobuilding?
Cheers On Wed, Apr 10, 2019 at 7:11 PM Hillen, Hauke <hauke.hil...@mpibpc.mpg.de> wrote: > Dear all, > > Thank you for your many suggestions! > Indeed, I was not able to fix the issue to my satisfaction. As Paul > suspected, set_add_terminal_residue_do_post_refine was already set to 0. > The triple-refine also did not improve anything. I also checked for the TER > records, which I also suspected first, but there are none in my PDB file. > > The workaround solution was to delete a larger number of residues and > eventually start adding from the opposite end of the chain I was adding > previously. For some reason, this worked in multiple instances. However, it > was a trial-and-error of how many residues I had to first remove and then > re-add to make it work. > > I am still puzzled by this - please let me know if anybody ever gets to > the root of this. > > Kind regards, > Hauke > ######################################################################## > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1 > ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1
