Nonbonded interactions? (if you approach this from classic geometry restraints used in refinement programs)
Pavel On Mon, Sep 17, 2018 at 2:09 PM Joel Tyndall <joel.tynd...@otago.ac.nz> wrote: > Hi, > > > > Polar interactions seems to make the most sense. This is what Pymol uses > as I don’t think it differentiates > > > > J > > > > *From:* CCP4 bulletin board <CCP4BB@JISCMAIL.AC.UK> *On Behalf Of *Sheila > Boreiko > *Sent:* Tuesday, 18 September 2018 8:06 AM > *To:* CCP4BB@JISCMAIL.AC.UK > *Subject:* [ccp4bb] collective term for hydrogen bonds and salt bridges > > > > Dear all, > > I had some literature search, but could not find clearly. Would there > be an appropriate term to call the sum of hydrogen bonds (HB) and salt > bridges (SB)? What about "hydrophilic interactions" or "polar > interactions"? I am analyzing the different number of theses interactions > in different monomers of my protein, as a totality I wanted to cite > (compare) the number of HB + SB, yet I think to specify them separately > could take out some focus of the discussion. > > Thank you, > > > Sheila > > > ------------------------------ > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1 > > ------------------------------ > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1 > ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1
