works now! thanks a lot, s
> On 07 May 2018, at 17:08, luis.fuentes-mont...@diamond.ac.uk > <luis.fuentes-mont...@diamond.ac.uk> wrote: > > Try typing the next two commands in your terminal before running "dui": > > > export BOOST_ADAPTBX_FPE_DEFAULT=1 > export BOOST_ADAPTBX_SIGNALS_DEFAULT=1 > > > This hack is NOT supposed to be needed, we should fix it with the next update. > > > Thanks, > > > Luiso > > ________________________________ > From: CCP4 bulletin board <CCP4BB@JISCMAIL.AC.UK> on behalf of Martín > Martinez Ripoll <xmar...@iqfr.csic.es> > Sent: 07 May 2018 14:48:11 > To: ccp4bb > Subject: Re: [ccp4bb] Introducing Dials User Interface for CCP4 > > Hi Luis, > > The same problem reported by Sebastiano (see below) regarding DUI (Dials User > Interface) occurs using Mac OSX 10.13.4 and older Quartz 2.7.9. > > Regards, > Martin > _________________________________________ > Dr. Martin Martinez-Ripoll > Research Professor Emeritus > xmar...@iqfr.csic.es<mailto:xmar...@iqfr.csic.es> > Department of Crystallography & Structural Biology > www.xtal.iqfr.csic.es<http://www.xtal.iqfr.csic.es/> > www.xtal.iqfr.csic.es/Cristalografia/<http://www.xtal.iqfr.csic.es/Cristalografia/> > Telf.: +34 917459550 > Consejo Superior de Investigaciones Científicas > Spanish National Research Council > [cid:image002.jpg@01D3E61A.CD4118D0] > > De: CCP4 bulletin board <CCP4BB@JISCMAIL.AC.UK> En nombre de Sebastiano > Pasqualato > Enviado el: lunes, 07 de mayo de 2018 13:43 > Para: CCP4BB@JISCMAIL.AC.UK > Asunto: Re: [ccp4bb] Introducing Dials User Interface for CCP4 > > > Hi Luis, > I’m trying to run the Dials user Interface on a Mac (OSX version 10.11.6, > Quartz 2.7.11). > i go into the directory where the images are, launch the dui and the > graphical user interface appears, without any image displayed. > When I click on the “select images” button, the program crashes with this > error message (in red). > Any hints on what is happening? > Thanks, > s > > spasqual@host065:~/Desktop/esrf_05052018/IEO_x2/data> dui > running Python version of lst_ext C++ Module > sys_arg.template= None > sys_arg.directory= None > str(e) = [Errno 2] No such file or directory: 'dials_files/bkp.pickle' > e.__doc__ = I/O operation failed. > e.message = > creating new DialsCommand (obj) > > Running process on posix > > > creating new DialsCommand (obj) > > Running process on posix > > > root_node.lin_num = 0 > > status > | lin num > | | command > | | | > ------------------ > S 0 \___Root > N 1 \___None <<< here > --------------------------- > TreeNavWidget(__init__) > idials_gui_path = > /Applications/ccp4-7.0/lib/py2/site-packages/mini_idials_w_GUI > The " output " set of parameters is automatically handled by idials > The " output " set of parameters is automatically handled by idials > The " output " set of parameters is automatically handled by idials > The " output " set of parameters is automatically handled by idials > The " output " set of parameters is automatically handled by idials > sys_arg_in = <mini_idials_w_GUI.main_dui.SysArgvData object at 0x113716590> > unable to update data panel > > turning log fonts to GREEN > > QWebSettings.JavascriptEnabled = 1 > No need to load HTML file yet > > > no datablock given > > No pickle file given > Unable to calculate mean and adjust contrast > test setStyle(QStyleFactory.create()) > 1 > failed to << check_gray_outs() >> > tmp_curr.lin_num == 1 > templ_text = ? > update_pbar_msg = click << Select File(s) >> or edit input line > libc backtrace (-1 frames, most recent call last): > Segmentation fault (sorry, call stacks not available) > This crash may be due to a problem in any imported > Python module, including modules which are not part > of the cctbx project. To disable the traps leading > to this message, define these environment variables > (e.g. assign the value 1): > BOOST_ADAPTBX_FPE_DEFAULT > BOOST_ADAPTBX_SIGNALS_DEFAULT > This will NOT solve the problem, just mask it, but > may allow you to proceed in case it is not critical. > spasqual@host065:~/Desktop/esrf_05052018/IEO_x2/data> > > > On 02 May 2018, at 17:37, > luis.fuentes-mont...@diamond.ac.uk<mailto:luis.fuentes-mont...@diamond.ac.uk> > <luis.fuentes-mont...@diamond.ac.uk<mailto:luis.fuentes-mont...@diamond.ac.uk>> > wrote: > > Dear ccp4bb, > > I am happy to introduce you to the new Dials User Interface (DUI) for CCP4. > > DUI is a graphical user interface that is designed to make data processing > with DIALS more user-friendly and efficient. A key feature is a full history > tree that keeps track of all steps of processing. Every position in the tree > represents the execution of a DIALS command line with full record of the > user-supplied parameters, and the results, which can be inspected with > several visualisation tools. At any step, the user can either fork, proceed > to the next command or navigate to another step without loss of information. > This ability to keep track of different branches of data processing gives the > user freedom to explore different hypotheses, such as the space group of the > crystal. > > DUI is intended to be intuitive and immediately useful across a wide range of > user expertise. Beginners learning about the integration process with DIALS > will benefit from the ease-of-use of the GUI and the visualisation tools. > Experts retain full control of the underlying DIALS programs and can use the > history tree to test different ideas quickly. > > DUI does not have a launcher from ccp4i2 yet, but you can launch it by just > typing dui from your terminal. I would recommend to cd to the directory with > your images first. And of course have updated CCP4 to the latest version. > > Enjoy! > > Thanks, > > Luis Fuentes-Montero (Luiso) > > > -- > This e-mail and any attachments may contain confidential, copyright and or > privileged material, and are for the use of the intended addressee only. If > you are not the intended addressee or an authorised recipient of the > addressee please notify us of receipt by returning the e-mail and do not use, > copy, retain, distribute or disclose the information in or attached to the > e-mail. > Any opinions expressed within this e-mail are those of the individual and not > necessarily of Diamond Light Source Ltd. > Diamond Light Source Ltd. cannot guarantee that this e-mail or any > attachments are free from viruses and we cannot accept liability for any > damage which you may sustain as a result of software viruses which may be > transmitted in or with the message. > Diamond Light Source Limited (company no. 4375679). Registered in England and > Wales with its registered office at Diamond House, Harwell Science and > Innovation Campus, Didcot, Oxfordshire, OX11 0DE, United Kingdom
