Hi Laurent, I seem to recall being able to click on outliers in the output of the phenix.refine GUI, which links to a Coot window. This would, however, require refinement in the Phenix suite rather than the CCP4 one.
Best, Chris On Thu, Mar 22, 2018 at 10:27 AM, maveyrau <laurent.maveyr...@ipbs.fr> wrote: > Hi all, > > I’m currently refining quite a big oligomer (about 3500 residues) using > refmac/coot, at a 2.85 A resolution. The Ramachandran tool in Coot > indicates about 100 outliers, and I would like to check them individually… > Is there a way to get a clickable list of outliers? I know I can click on > the Ramachandran plot directly, but with so many residues it’s quite > impossible to go through all of them… > > Thanks for any advices… > Laurent > ---------------------------------------------------------- > Laurent Maveyraud laurent.maveyraud AT ipbs DOT fr > P I C T --- Plateforme Intégrée de Criblage de Toulouse > Université Paul Sabatier / CNRS / I.P.B.S. UMR 5089 > Département Biologie Structurale et Biophysique > http://cribligand.ipbs.fr http://www.ipbs.fr > 205 route de Narbonne 31077 TOULOUSE Cedex FRANCE > Tél: +33 (0)561 175 435 Mob.: +33 (0)646 042 111 > ---------------------------------------------------------- > > > > >
