It looks like 6 coordinated metal atom with coordinated (possibly) with waters. 
The simplest case could be NA. You could use anomalous difference map to see if 
there is any anomalous signal there.

Regards
Garib


On 6 Mar 2018, at 22:19, Rajesh Kumar <rajesh.p...@gmail.com> wrote:

> Dear All,
> 
> Have you had experience with this kind of density? I am wandering what this 
> could be?
> 
> Thank you very much for the help.
> 
> -Rajesh
> 
> 
> <Screen Shot 2018-03-06 at 5.15.20 PM.png>
> 

Dr Garib N Murshudov
MRC-LMB
Francis Crick Avenue
Cambridge 
CB2 0QH UK
Web http://www.mrc-lmb.cam.ac.uk, 
http://www2.mrc-lmb.cam.ac.uk/groups/murshudov/



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