Dear Ameya,
DipCheck uses a novel 3-dimensional parameter space for validation of
the backbone geometry, and we hope that it can be more informative than
some of the existing validation approaches. We also hope that DipCheck
can be a good validation tool as its inverse task does not seem to be
solvable - in other words the DipCheck parameter space cannot be used to
better 'geometrise' a protein model. We are discussing with the PDB
colleagues a possibility for DipCheck to join the PDB validation tools.
With best regards,
Victor
On 04/09/2017 16:53, ameya benz wrote:
Dear Victor,
I used the server. However I found that the % of residues in
disallowed region given by your server and PDB validation server
differs. What could be the probable reason?
regards,
Ameya
On Mon, Sep 4, 2017 at 8:12 PM, Victor Lamzin <vic...@embl-hamburg.de
<mailto:vic...@embl-hamburg.de>> wrote:
Dear Colleagues,
We announce the DipCheck Webservice for validation of backbone
geometry in protein structures as described in:
https://doi.org/10.1107/S2052252517008466
<https://doi.org/10.1107/S2052252517008466>
The Webservice is available at:
http://cluster.embl-hamburg.de/dipcheck
<http://cluster.embl-hamburg.de/dipcheck>
Joana Pereira, Umut Oezugurel, Philipp Heuser and Victor Lamzin
