Title: Bioinformatics Software Specialist II

Harvard Medical School, Department of Biological Chemistry and Molecular
Pharmacology

Job summary:

The SBGrid Consortium at Harvard Medical School (www.sbgrid.org) is an
international collaboration to provide the biomedical community with
support for research computing. SBGrid’s primary service is the curation,
deployment, and maintenance of a comprehensive set of software and
computational tools that are useful in biomedical research. The SBGrid
software library is, effectively, a kind of scientific ‘app store’ that
allows users to access a wide range of up-to-date applications without
having to download, compile, configure, maintain, or update software. We
support over 300 different scientific applications and software suites on
Linux and OS X operating systems. Read more about the SBGrid project in our
eLife paper:  (https://elife.elifesciences.org/content/2/e01456
<http://elife.elifesciences.org/content/2/e01456>).

Primary job responsibilities:

The SBGrid Consortium has an immediate opening for a PhD level
Bioinformatics Software Specialist. The primary responsibilities of the
position will be installation, configuration, and testing of biomedical
software on Linux and OS X platforms for use in the Consortium laboratories
and providing bioinformatics software support for scientists at Harvard and
SBGrid institutions. Additional responsibilities include working with
scientific software developers to integrate new applications into the
software collection.

The scientific software in SBGrid’s collection is written in a polyglot of
languages (Fortran, C, C++, Python, Java, Perl, Tcl/Tk and sh/csh scripts)
and built with any one of a number of different build systems (autotools,
cmake, scons, homebrew shell scripts/makefiles, setuptools, etc). This
Bioinformatics Software Specialist position is a hybrid, in which some
software development experience is useful, but it is not a traditional
developer job in any sense. You will work in a multidisciplinary research
and computing environment that integrates cutting edge science, rapidly
evolving software workflows, high-performance computing, and novel data
collection instruments.

Qualifications:

   -

   Familiarity with bioinformatics and/or structural biology applications
   and workflows
   -

   Strong knowledge of Linux and OS X operating systems
   -

   Bash and/or csh shell scripting experience
   -

   Working knowledge of at least one programming language
   -

   Experience compiling and installing software from source and
   troubleshooting associated problems
   -

   Proficiency working in High-Performance Computing environments
   -

   Autodidact with strong attention to detail and enthusiasm for hard
   problems


Requirements:

PhD/MS in structural biology or bioinformatics.

Additional Qualifications:

The successful candidate will have excellent organizational skills and an
ability to work independently and prioritize work. Proven project and/or
program management skills. Excellent interpersonal and communications
skills.
To apply, email the SBGrid Consortium at ap...@hkl.hms.harvard.edu.

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