Dear Kay,
Exactly. That is why we provided two Linux versions (called pdb2ins and
pdb2ins_oldlinux) on the SHELX server.
So far two versions seem to be enough and for Macs and Windows only one
version seems to be required. If
anyone finds this to be insufficient, please let Anna know giving
details of which OS or Linux distribution you
are using.
At the moment we are only providing 64-bit versions of pdb2ins and there
have been no complaints about that.
This raises the question of whether I am wasting my time providing both
32- and 64-bit versions of all the SHELX
programs?!
Best wishes, George
CC Anna
On 10/26/2016 05:12 PM, Kay Diederichs wrote:
Hi Phil,
the error message occurs because your glibc is too old for this binary. The
glibc cannot easily be updated, it is tied to the distribution, in your case
RHEL6. A newer kernel does not change this, nor would an update to RHEL 6.8
This is why distributed Linux software should be built on dated distributions.
Best,
Kay
On Wed, 26 Oct 2016 12:11:25 +0100, Phil Evans<p...@mrc-lmb.cam.ac.uk> wrote:
Hi George
I�m not sure that anyone here is using shelxl but I�ve just updated our general
64-bit Linux versions anyway. shell starts OK, but with pdb2ins I get a
complaint. Do you understand this? (I should probably ask our local guys)
Our system is
Scientific Linux release 6.7 (Carbon)
./pdb2ins
./pdb2ins: /lib64/libc.so.6: version `GLIBC_2.14' not found (required by
/tmp/_MEIQO85tj/libz.so.1)
best wishes
Phil
On 25 Oct 2016, at 20:31, George Sheldrick<gshe...@shelx.uni-ac.gwdg.de> wrote:
SHELXL may be used to refine both small and macromolecular structures against
X-ray or neutron diffraction data, including non-merohedral twins. A new
version 2016/6 of SHELXL may now be downloaded from the SHELX server. It has
been well tested by about 20 volunteers to whom I am very grateful. A new
version of Anna Luebben's program PDB2INS is also available there (for 64 bit
systems only). PDB2INS makes the preparation of the .ins and .hkl files to run
macromolecular SHELXL refinements much easier. For most structures deposited in
the PDB since 2008 these two files can be generated automatically and no
changes are needed to run SHELXL.
George
--
Prof. George M. Sheldrick FRS
Dept. Structural Chemistry,
University of Goettingen,
Tammannstr. 4,
D37077 Goettingen, Germany
Tel. +49-551-39-33021 or -33068
Fax. +49-551-39-22582
--
Prof. George M. Sheldrick FRS
Dept. Structural Chemistry,
University of Goettingen,
Tammannstr. 4,
D37077 Goettingen, Germany
Tel. +49-551-39-33021 or -33068
Fax. +49-551-39-22582
