If the metal center is a stable complex then ICP-OES or XRF (e.g. TXRF)
methods can easily identify and quantify metals present in a small sample
of protein.

Roger Rowlett
Dear All

I have solved a structure of a metal-ion dependent exonuclease enzyme. In
homologous structures, two or three Manganese ions are present at catalytic
center. However, I have used 2 mM MgCl2 in protein purification buffer. I
tried to fit both of these metal ions at catalytic center but in both cases
it still shows green density (Sigma level ~ 7) in difference map and low
b-factor (<10) for these metal ions. For better understanding I have
attached the screenshot of metal ions with difference map on. Please
suggest me the possible reasons or methods to validate the presence of any
other metal ions at catalytic center.

Thanks in advance.

Regards
Dilip Kumar
Research Associate
Chemical and Systems Biology Unit
CSIR-Institute of Genomics & Integrative Biology
Delhi-110025

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