I'm trying to generate an oligomer using pdbset with the script attached below. The rotated molecules appear to be oriented properly, but they cannot be viewed correctly in PYMOL because the cartoon option fails to connect many of the residues. What am I doing wrong?
Thanks, Charlie pdbset XYZIN $1.pdb XYZOUT temp.pdb <<EOF-pdbset CHAIN A SYMGEN Y-0.5,-X+0.5,Z OUTPUT PDB END EOF-pdbset
