I say try going to lower symmetry, see what the twin fractions are. Also, 
perhaps try refmac, where twin fractions are automatically defined/refined.

JPK

From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of Mengbin 
Chen
Sent: Thursday, June 11, 2015 12:35 AM
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] twinned data refinement

Hello everyone,

I am refining a 2.5 angstrom structure whose phase is solved by molecular 
replacement with a search probe determined by SAD with 3 angstrom resolution. 
While I am able to see densities of a bunch of water molecules and ligands in 
the MR solved structure, which means that the phase is correct, the Rfree gets 
stuck at ~27%. The crystal belongs to P3221 and has a twinning fraction of 19%, 
according to Xtriage. Currently I've been sticking to Phenix for refinement, 
and twin law (-h, -k, l) has been applied.

I was wondering if the CCP4 community would have any suggestions of how to 
refine this twinned structure, such as softwares to use, tricky strategies to 
choose, etc. I really appreciate any recommendations you would come up with my 
situation!

Thank you in advance!

Best,
Mengbin

--
Mengbin Chen
PhD Candidate
Christianson Laboratory
Department of Chemistry
University of Pennsylvania
231 S. 34th Street, #323
Philadelphia, PA 19104 USA
Phone: (215)898-2227
Email: mengb...@sas.upenn.edu<mailto:mengb...@sas.upenn.edu>

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