Reduce also has an option to remove hydrogens at the command line. [phenix.]reduce -Trim model.pdb
Cheers Nigel --- Nigel W. Moriarty Building 64R0246B, Physical Biosciences Division Lawrence Berkeley National Laboratory Berkeley, CA 94720-8235 Phone : 510-486-5709 Email : nwmoria...@lbl.gov Fax : 510-486-5909 Web : CCI.LBL.gov On Tue, May 19, 2015 at 8:49 AM, Nikhil Bharambe <nikh...@mbu.iisc.ernet.in> wrote: > Dear Mohammad, > You can use 'modify pdb' tool in phenix utilities and select remove > hydrogen > option. > Also, if you are familiar with Vim editor in linux then there is easy > command > (:g/ H/d). > > Regards, > > NIKHIL G BHARAMBE, > Ph.D Student, > Prof. K. Suguna's Lab > Molecular Biophysics Unit (MBU) > IISc, Bangalore. > > > -- > This message has been scanned for viruses and > dangerous content by MailScanner, and is > believed to be clean. >
