There are different servers and programs which I use as guides (TOPDRAW comes to mind), but for publication purposes I always end up drawing topology diagrams myself - for what I consider maximum clarity. It takes time, but I prefer to show things the way I think is best showing them, using the output from one or more of these programs as guide. It is than also easier to change them upon suggestions of collaborators or referees.
Mark J van Raaij Dpto de Estructura de Macromoleculas Centro Nacional de Biotecnologia - CSIC c/Darwin 3 E-28049 Madrid, Spain tel. (+34) 91 585 4616 http://www.cnb.csic.es/~mjvanraaij On 20 May 2015, at 11:50, Mohammad Khan wrote: > Dear all, > > Is there any good online server for the generation of topology cartoons of > proteins, where one can have a clear layout of the various secondary > structures? > > I have tried Pro-Origami, but however I am not veru happy with the output. I > have used the default options. Maybe if someone can help me out with various > options. > > I would want to use the output for publication purposes. > > Thanks > > Mohammad > >
