Hi, For loops, there are servers like SuperLooper http://bioinf-applied.charite.de/superlooper/ ModLoop http://modbase.compbio.ucsf.edu/modloop/ FALC-Loop http://falc-loop.seoklab.org/ (seems to be down)
If you want model flexible region itself, there is a program called flexible-meccano. http://www.ibs.fr/science-213/scientific-output/software/flexible-meccano?la ng=en Cheers, Min-Kyu | -----Original Message----- | From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of | Tommi Kajander | Sent: Wednesday, October 22, 2014 8:43 AM | To: CCP4BB@JISCMAIL.AC.UK | Subject: [ccp4bb] "modeling" flexible ends on proteins | | Hi All, | | Would anyone know a software to model (just with some kind of random | coil) the amino acid chain for the assumed flexible disorderd regions | between domains, or at one end of protein? just for illustrative purposes. | | Thanks! | Tommi
