Hi Thomas, maybe you can try to use AMBER programs. http://ambermd.org/ I think these programs allow you to use different forcefield to minimise the energy of your model.
Hope to Help Nicolas ________________________________________ De : CCP4 bulletin board [CCP4BB@JISCMAIL.AC.UK] de la part de Thomas RORET [thomas.ro...@univ-lorraine.fr] Envoyé : jeudi 16 janvier 2014 15:32 À : CCP4BB@JISCMAIL.AC.UK Objet : [ccp4bb] Docking model Hi, I made one docking model of a protein complex by NMR and another one by modeling. I wanted to knowwhich software to useto minimize the energy (close contacts, H bonds, ...) best regards, Thomas. -- Thomas RORET BioMod Team Tel. 00 333 83 68 47 89 CRM2 UMR CNRS-UL 7036 Faculté des Sciences et Technologies BP 70239 54506 Vandoeuvre-les-Nancy
