On Mon, 2013-02-11 at 09:56 +0100, Robbie Joosten wrote:
> This is a 'compatability' option in Refmac that internally renames
> atoms. If you comment out 'MMA . C7 CM' in your
> mon_lib_list.cif file, the problem will disappear.
>
Robbie,
thanks a lot - this fixes it.
Is this still considered a bug? From what I understand, the
data_comp_synonym_atom_list entry indicates that whenever MMA C7 atom is
encountered, it will be internally renamed to CM. However, the
$CCP4_LIB/data/monomers/m/MMA.cif should then refer to CM as well. But
that cif-file still uses C7.
Maybe this gets fixed in ccp4 updates, which reminds me to get that set
up at last.
Cheers,
Ed.
--
After much deep and profound brain things inside my head,
I have decided to thank you for bringing peace to our home.
Julian, King of Lemurs
