On 19/11/12 10:32, Jenny Harmer wrote:
I would like to add CONECT records to my pdb file to indicate interactions between protein side chains and a co-factor (all of the related proteins contain them).
I don't think CONECT records are the canonical method to specify such a think (if you mean covalent bond).
I am using Coot to refine the structure but have access to other programs. Is there a program to introduce these records into the pdb file or is it done automatically when the pdb has been submitted?
I think you want a LINK record Extensions -> Modelling -> Make Link. Paul.