I'm unable to reproduce the error. Can you try it in a temporary new account that doesn't have anything modified, and see if it works?
William G. Scott Professor Department of Chemistry and Biochemistry and The Center for the Molecular Biology of RNA 228 Sinsheimer Laboratories University of California at Santa Cruz Santa Cruz, California 95064 USA On Aug 8, 2012, at 4:50 PM, Jinyi Zhu <jinyi.c...@gmail.com> wrote: > Hi, > > I recently upgrade to Mountain Lion and update fink following the official > instructions. After that, CCP4, Phenix and pymol all run well without > problems. However, I could not start Coot. The error message is as following: > > DEBUG:: stating pydirectory /sw/share/coot/python > INFO:: importing coot.py from /sw/share/coot/python/coot.py > Importing python module coot using command from coot import * > INFO:: coot.py imported > Fatal Python error: PyThreadState_Get: no current thread > /sw/bin/coot: line 6: 66155 Abort trap: 6 /sw/bin/coot-real "$@" > > I have update all fink packages up to date and tried to re-install Coot by > compiling after removing Coot completely. Does anyone have some good > suggestion to make Coot work? Thanks! > > Best, > > Jinyi