Hello Fellow PHENIX users (and others!) I had been using PHENIX to generate iterative build composite OMIT maps. I was able to perform these runs with automated settings for two of my data. With the third one (1.2 A structure) I get an error. I am pasting a part of the message below:
*************ERROR ENDING ******************* ******************************************************************************** Failed to carry out AutoBuild_multiple_models: ******************************************************************************** Sorry, a subprocess has failed... END OF LOG FILE ... utoBuild Run 1 ... Build cycle 1 of 16 method:rebuild Initial rebuild cycle: just combining previous models or copying over initial PDB file Using edited_pdb.pdb for rebuild, copied to unrefined.pdb_1 Refining model: unrefined.pdb_1 No refinement carried out (may need free R flags) Error message from phenix.refine: 'function' object has no attribute 'as_mtz_dataset' Refinement failed... *************ERROR ENDING ******************* I was able to get this error three times in a row and only for this dataset! I'm wondering if there is anything special with the resolution limit? I saw a similar post on phenixbb and I have been using a fairly recent phenix version (1.7.3-928). Can this indicate something wrong with my settings (or lack thereof) that I am doing? Is there a way to work around this? Any advice would be much appreciated! Regards, Naveed Faculty of Pharmacy, University of Sydney
