Dear Sreetama,
theseus can superpose multiple structures and reports RMSD per residue.
http://www.theseus3d.org/
If your sequences are not identical and you want least squares
superposition, run it like this:
theseus_align -l -f *.pdb
This will produce several output files. The file "theseus_variances.txt"
contains the RMSD per residue.
Cheers,
Thomas
On 02/21/2012 10:33 AM, sreetama das wrote:
Dear all,
Is there any software which will print the RMSDs (residue wise, and not
chain wise) for more-than-2 chains (having similar/same sequences)
superposed together?
Thanks in advance,
sreetama
--
Thomas Holder
MPI for Developmental Biology
Spemannstr. 35
D-72076 Tübingen
