Aline does also read a dssp file and print the schematic representation above. Probably this is also possible with STRAP. I am not sure which program exactly the pdb use for their diagrams.
Regards Christian Am Samstag 04 Februar 2012 12:11:09 schrieb Vellieux Frederic: > I believe Procheck generates drawings such as those. It generates > PostScript files, and if you need to have (eg) jpg files, a PostScript > interpreter, screen capture and there you are (Gimp to select only the > areas you're interested in) > > HTH, > > Fred. > > WENHE ZHONG wrote: > > Dear memebers, > > > > > > Thank you all firsit for the helps on my previous post about sequence > > alignment. They are really useful! > > > > Apologize for the off-topic question again. I usually use DSSP method > > to calculate the secondary structures on my sovled structures. I saw a > > nice schematic representation for secondary structure from PDB > > database website (please see the attached figure). Does anyone know > > whether there is a program to draw these schematics? Thank you. > > > > King regards, > > Wenhe > > > > ------------------------------------------------------------------------ > > > > > > ------------------------------------------------------------------------ >
