Hi Stacy,
If you give the CCP4 program crank a try, I can give you advice, if
needed. It can work with SAD data.
Best wishes,
Raj
On Thu, 8 Dec 2011, stacy William wrote:
Dear All...I am new user for Phenix. I am right now working with SAD data. I
had run Ausol in GUI interface with my SAD anamolous data. but when i am
using the output file for my autobuild program it is giving problems with
Resolve... n terminating with an error message suggesting to check resolve
file. Do i need to change some parameters in Autosol to produce right output
files which in turn can work as input files for Autobuild program
Thanks
Stacy
On Tue, Nov 22, 2011 at 8:21 PM, David Waterman <dgwater...@gmail.com>
wrote:
In addition, perhaps a safer test of ADXV than the set of Mar IP
frames I suggested is by using a file from an ADSC detector,
such as this one (thanks to James Holton):
http://bl831.als.lbl.gov/example_data_sets/ALS/831/Gd_lyso1/ALS831_lyso_Gd_
001.img
I have no reason to believe the image plate frames shouldn't work with
ADXV other than that I haven't tested it. I would be extremely
surprised however if the ADSC image doesn't work with a properly
functioning ADXV.
-- David
On 22 November 2011 14:41, Andrew Purkiss
<a.purk...@mail.cryst.bbk.ac.uk> wrote:
Hi Rajesh,
That is a very old version (1.9.4) of ADXV.
Try the current version from here
http://www.scripps.edu/~arvai/adxv/
version 1.9.8 works fine for us and opens Pilatus data
without modifying
the files.
Hope this helps.
Andrew Purkiss
--
X-ray Laboratory Manager,
London Research Institute,
Cancer Research UK.
On Tue, 2011-11-22 at 09:30 -0500, Rajesh kumar wrote:
> Hi Andrzej,
>
>
> I used exactly what you have suggested.
> Downloaded file adxv.i686FC2.tgz from some place.
> untar Gunzip so I get a folder adxv.1686FC2 which has
adxv and
> adxv.1686FC2_static files.
> I made both executable using chmod.
> I put the PATH in .bashrc
> If I run this command in the folder where images are
then
> it opens with "Windows open but the file selection
dialogue is locked
> and the selection pattern is 0.*."
>
>
> But not functional and get the error I posted recently
>
>
> pin8]$ adxv pin8_1_144.img
> (standard_in) 1: parse error
> (standard_in) 1: parse error
> (standard_in) 1: parse error
> beam_center x = pixels , mm
> beam_center y = pixels , mm
> distance = mm
> overload = counts
> pixelsize = 0.172 mm
> wavelength = Angstroem
>
>
> Adxv Version 1.9.4-beta
> Copyright (C) 1994-2007 by Andrew Arvai, Area Detector
Systems
> Corporation
> Using 24-bit TrueColor visual
> Warning: translation table syntax error: Unknown keysym
name:
> osfActivate
> Warning: ... found while parsing ':<Key>osfActivate:
> ManagerParentActivate()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: translation table syntax error: Unknown keysym
name:
> osfBeginLine
> Warning: ... found while parsing ':<Key>osfBeginLine:
> ManagerGadgetTraverseHome()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: translation table syntax error: Unknown keysym
name: osfHelp
> Warning: ... found while parsing ':<Key>osfHelp:
> ManagerGadgetHelp()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: translation table syntax error: Unknown keysym
name:
> osfActivate
> Warning: ... found while parsing ':<Key>osfActivate:
> ManagerParentActivate()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: translation table syntax error: Unknown keysym
name:
> osfActivate
> Warning: ... found while parsing ':<Key>osfActivate:
> PrimitiveParentActivate()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: translation table syntax error: Unknown keysym
name: osfHelp
> Warning: ... found while parsing ':<Key>osfHelp:
> Help()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: translation table syntax error: Unknown keysym
name:
> osfActivate
> Warning: ... found while parsing ':<Key>osfActivate:
> PrimitiveParentActivate()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: translation table syntax error: Unknown keysym
name:
> osfCancel
> Warning: ... found while parsing ':<Key>osfCancel:
MenuEscape()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: translation table syntax error: Unknown keysym
name:
> osfSelect
> Warning: ... found while parsing ':<Key>osfSelect:
> ArmAndActivate()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: translation table syntax error: Unknown keysym
name:
> osfActivate
> Warning: ... found while parsing ':<Key>osfActivate:
> PrimitiveParentActivate()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: Locale not supported for
XmbTextListToTextProperty
> Warning: Cannot convert XmString to compound text
> Warning: translation table syntax error: Unknown keysym
name:
> osfPrimaryPaste
> Warning: ... found while parsing ':m
> <Key>osfPrimaryPaste:cut-primary()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: translation table syntax error: Unknown keysym
name:
> osfActivate
> Warning: ... found while parsing ':<Key>osfActivate:
> PrimitiveParentActivate()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: translation table syntax error: Unknown keysym
name:
> osfActivate
> Warning: ... found while parsing ':<Key>osfActivate:
> PrimitiveParentActivate()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: translation table syntax error: Unknown keysym
name:
> osfSelect
> Warning: ... found while parsing ':<Key>osfSelect:
> ArmAndActivate()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: translation table syntax error: Unknown keysym
name:
> osfPrimaryPaste
> Warning: ... found while parsing ':m
> <Key>osfPrimaryPaste:cut-primary()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: translation table syntax error: Unknown keysym
name:
> osfSelect
> Warning: ... found while parsing ':<Key>osfSelect:
> ManagerGadgetSelect()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: translation table syntax error: Unknown keysym
name:
> osfSelect
> Warning: ... found while parsing ':<Key>osfSelect:
> MenuBarGadgetSelect()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: translation table syntax error: Unknown keysym
name:
> osfActivate
> Warning: ... found while parsing ':<Key>osfActivate:
> ManagerParentActivate()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: translation table syntax error: Unknown keysym
name: osfHelp
> Warning: ... found while parsing ':<Key>osfHelp:
> MenuHelp()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: translation table syntax error: Unknown keysym
name:
> osfActivate
> Warning: ... found while parsing ':<Key>osfActivate:
> PrimitiveParentActivate()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: translation table syntax error: Unknown keysym
name:
> osfActivate
> Warning: ... found while parsing ':<Key>osfActivate:
> DrawingAreaInput() ManagerParentActivate()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: translation table syntax error: Unknown keysym
name: osfUp
> Warning: ... found while parsing ':<Key>osfUp:
> DrawingAreaInput() ManagerGadgetTraverseUp()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: translation table syntax error: Unknown keysym
name:
> osfSelect
> Warning: ... found while parsing ':<Key>osfSelect:
KeySelect()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: translation table syntax error: Unknown keysym
name:
> osfSelect
> Warning: ... found while parsing ':<Key>osfSelect:
KeySelect()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: translation table syntax error: Unknown keysym
name:
> osfCancel
> Warning: ... found while parsing '<Key>osfCancel:
> MenuEscape()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: translation table syntax error: Unknown keysym
name:
> osfBeginLine
> Warning: ... found while parsing ':s c
<Key>osfBeginLine:
> ListBeginDataExtend()'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: translation table syntax error: Unknown keysym
name:
> osfBeginLine
> Warning: ... found while parsing ':c <Key>osfBeginLine:
> ActionGrab(SWTopLine)'
> Warning: String to TranslationTable conversion
encountered errors
> Warning: Locale not supported for
XmbTextListToTextProperty
> Warning: Cannot convert XmString to compound text
> Warning: Locale not supported for
XmbTextListToTextProperty
> Warning: Cannot convert XmString to compound text
> No such file: 0.172
>
>
> Loading predictions from: -wavelength
> error: can not open: -wavelength
>
>
>
>
> Thanks
> Rajesh
>
> > Date: Tue, 22 Nov 2011 15:13:33 +0100
> > From: aln...@gmail.com
> > Subject: Re: [ccp4bb] adxv
> > To: CCP4BB@JISCMAIL.AC.UK
> >
> > Rajesh,
> >
> > I think there is a simpler explanation to your
problems but we need
> to
> > go back to the installation of adxv on your linux
machine.
> >
> > How did you extract adxv binary from the *.gz file?
> >
> > I've actually learned yesterday that if you use
graphic tools to
> > extract the binary the resulting file will not be
fully functional!
> > Windows open but the file selection dialogue is locked
and the
> selection
> > pattern is 0.*.
> >
> > Use command line 'gunzip' to extract the binary.
> > Don't forget to 'chmod +x' on the resulting file and
you should have
> a
> > working adxv.
> >
> > Andrzej
> >
> > On 11/22/11 3:07 PM, Ian Tickle wrote:
> > > Rajesh
> > >
> > > I use adxv (as well as xemacs, xdsview, imosflm,
hklview, ipdisp
> etc)
> > > over ssh/Cygwin X11 from Windows XP to a Centos
(like RedHat)
> server
> > > with no problems at all.
> > >
> > > I suspect your xming either just doesn't have the
requisite X11
> libs
> > > or somehow they have not gotten installed on your
system. Can you
> try
> > > Cygwin/X11, it's very easy to install.
> > >
> > > Cheers
> > >
> > > -- Ian
> > >
> > > On 22 November 2011 13:49, Rajesh
kumar<ccp4...@hotmail.com>
> wrote:
> > >> Dear Tim,
> > >> Yes, I have windows 7 computer and use ccp4 and
phenix through
> xming/putty
> > >> and I run them over linux lab computer.
> > >> Sorry if I have confused you all with insufficient
information.
> > >> On the lab linux system, I installed everything you
suggested in
> BASH and
> > >> it works but not completely.
> > >> Core manager kind of not interested to look in to
it and I dont
> know much to
> > >> understand everything you nice people saying here.
> > >> So instead I used idiffdisp and it opens the image.
But wanted
> adxv to work
> > >> thats all.
> > >> Thanks
> > >> Raj
> > >>> Date: Tue, 22 Nov 2011 14:41:00 +0100
> > >>> From: t...@shelx.uni-ac.gwdg.de
> > >>> To: ccp4...@hotmail.com
> > >>> CC: CCP4BB@JISCMAIL.AC.UK
> > >>> Subject: Re: [ccp4bb] adxv
> > >>>
> > >>> -----BEGIN PGP SIGNED MESSAGE-----
> > >>> Hash: SHA1
> > >>>
> > >>> Dear Rajesh,
> > >>>
> > >>> are you saying that the computer you are sitting
in front of is
> a
> > >>> windows computer?
> > >>> Are you sure you have been using CCP4 and phenix
through an
> > >>> ssh-connection and not the respective
windows-binaries?
> > >>>
> > >>> I am not familiar with windows and the possible
existence of
> > >>> X11-clients, but I would think that most
suggestions to you
> assumed that
> > >>> your client computer was also a linux-machine.
> > >>>
> > >>> Cheers,
> > >>> Tim
> > >>>
> > >>> On 11/22/2011 02:27 PM, Rajesh kumar wrote:
> > >>>>
> > >>>> I don't know if I need that installed on my
windows computer
> terminal.On
> > >>>> the server also I could run adxv. Thought of
using other ccp4
> utilities.
> > >>>> Thanks for everyone for the help. I give up.
> > >>>> Regards,Rajesh
> > >>>>
> > >>>>> Date: Mon, 21 Nov 2011 11:36:14 -0500
> > >>>>> From: ber...@upstate.edu
> > >>>>> Subject: Re: [ccp4bb] adxv
> > >>>>> To: CCP4BB@JISCMAIL.AC.UK
> > >>>>>
> > >>>>> yum install lesstif ?
> > >>>>>
> > >>>>> but wouldn't the motif stuff be required for the
X-server,
> i.e. your
> > >>>>> terminal, not for the
> > >>>>> server running adxv?
> > >>>>>
> > >>>>> Rajesh kumar wrote:
> > >>>>>> Dear Mark,
> > >>>>>>
> > >>>>>> $ locate XKeysymDB - didnt come with any thing
suggests
> probably
> > >>>>>> openmotif lib is not
> > >>>>>> installed.
> > >>>>>> I linux server has Fedora and I am using latest
version of
> Adxv so
> > >>>>>> details on the sbgrid
> > >>>>>> suggest its same problem.
> > >>>>>>
> > >>>>>> So how would I fix this.
> > >>>>>>
> > >>>>>> Thanks for your time.
> > >>>>>>
> > >>>>>> Regards
> > >>>>>> Rajesh
> > >>>>>>
> > >>>>>>
> > >>>>>>> Date: Sun, 20 Nov 2011 23:18:32 +0000
> > >>>>>>> Subject: Re: [ccp4bb] adxv
> > >>>>>>> From: mark.x.bro...@gmail.com
> > >>>>>>> To: ccp4...@hotmail.com
> > >>>>>>> CC: CCP4BB@jiscmail.ac.uk
> > >>>>>>>
> > >>>>>>> Dear Rajesh,
> > >>>>>>> Are you using the Openmotif library? If so, do
you
> > >>>>>>> have an XKeysymDB file installed?
> > >>>>>>> In as shell, issue:
> > >>>>>>> $ locate XKeysymDB
> > >>>>>>> You may need to symlink it to
/usr/X11R6/lib/X11/XKeysymDB
> if it is
> > >>>>>>> elsewhere [1].
> > >>>>>>> I suspect you're not the only one to have seen
this [2].
> > >>>>>>>
> > >>>>>>> I hope this helps.
> > >>>>>>>
> > >>>>>>> Mark
> > >>>>>>> [1]
> > >>>>>>
> > >>>>>>
>ftp://ftp.parallelgeo.com/SPW_Products/Linux/Current_Release/ReadMe_for_rec
ent_Linux_distributions.txt
> > >>>>>>> [2] http://sbgrid.org/news/newsletters/2009/06
(search for
> the
> > >>>>>>> string "adxv")
> > >>>>>>>
> > >>>>>>>
> > >>>>>>> On 20 November 2011 19:45, Rajesh
kumar<ccp4...@hotmail.com>
> wrote:
> > >>>>>>>>
> > >>>>>>>> Dear Tim,
> > >>>>>>>> Thanks. Your suggestion of adding to PATH
works and its not
> > >>>>>>>> completely functional may
> > >>>>>> be due to the Ximg/ssh or some thing to do with
display.
> > >>>>>>>> All three windows opened but couldn't open
any image as it
> didn't
> > >>>>>>>> display in the list
> > >>>>>> of autoload window. Pattern shows *.0.
> > >>>>>>>>
> > >>>>>>>> $adxv pin8_1_180.img
> > >>>>>>>>
> > >>>>>>>> (standard_in) 1: parse error
> > >>>>>>>> (standard_in) 1: parse error
> > >>>>>>>> (standard_in) 1: parse error
> > >>>>>>>> beam_center x = pixels , mm
> > >>>>>>>> beam_center y = pixels , mm
> > >>>>>>>> distance = mm
> > >>>>>>>> overload = counts
> > >>>>>>>> pixelsize = 0.172 mm
> > >>>>>>>> wavelength = Angstroem
> > >>>>>>>> Adxv Version 1.9.4-beta
> > >>>>>>>> Copyright (C) 1994-2007 by Andrew Arvai, Area
Detector
> Systems
> > >>>>>>>> Corporation
> > >>>>>>>> Using 24-bit TrueColor visual
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfActivate
> > >>>>>>>> Warning: ... found while parsing
':<Key>osfActivate:
> > >>>>>>>> ManagerParentActivate()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfBeginLine
> > >>>>>>>> Warning: ... found while parsing
':<Key>osfBeginLine:
> > >>>>>>>> ManagerGadgetTraverseHome()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfHelp
> > >>>>>>>> Warning: ... found while parsing
':<Key>osfHelp:
> > >>>>>>>> ManagerGadgetHelp()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfActivate
> > >>>>>>>> Warning: ... found while parsing
':<Key>osfActivate:
> > >>>>>>>> ManagerParentActivate()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfActivate
> > >>>>>>>> Warning: ... found while parsing
':<Key>osfActivate:
> > >>>>>>>> PrimitiveParentActivate()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfHelp
> > >>>>>>>> Warning: ... found while parsing
':<Key>osfHelp: Help()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfActivate
> > >>>>>>>> Warning: ... found while parsing
':<Key>osfActivate:
> > >>>>>>>> PrimitiveParentActivate()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfCancel
> > >>>>>>>> Warning: ... found while parsing
':<Key>osfCancel:
> MenuEscape()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfSelect
> > >>>>>>>> Warning: ... found while parsing
':<Key>osfSelect:
> > >>>>>>>> ArmAndActivate()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfActivate
> > >>>>>>>> Warning: ... found while parsing
':<Key>osfActivate:
> > >>>>>>>> PrimitiveParentActivate()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: Locale not supported for
XmbTextListToTextProperty
> > >>>>>>>> Warning: Cannot convert XmString to compound
text
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfPrimaryPaste
> > >>>>>>>> Warning: ... found while parsing ':m
> > >>>>>>>> <Key>osfPrimaryPaste:cut-primary()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfActivate
> > >>>>>>>> Warning: ... found while parsing
':<Key>osfActivate:
> > >>>>>>>> PrimitiveParentActivate()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfActivate
> > >>>>>>>> Warning: ... found while parsing
':<Key>osfActivate:
> > >>>>>>>> PrimitiveParentActivate()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfSelect
> > >>>>>>>> Warning: ... found while parsing
':<Key>osfSelect:
> > >>>>>>>> ArmAndActivate()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfPrimaryPaste
> > >>>>>>>> Warning: ... found while parsing ':m
> > >>>>>>>> <Key>osfPrimaryPaste:cut-primary()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfSelect
> > >>>>>>>> Warning: ... found while parsing
':<Key>osfSelect:
> > >>>>>>>> ManagerGadgetSelect()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfSelect
> > >>>>>>>> Warning: ... found while parsing
':<Key>osfSelect:
> > >>>>>>>> MenuBarGadgetSelect()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfActivate
> > >>>>>>>> Warning: ... found while parsing
':<Key>osfActivate:
> > >>>>>>>> ManagerParentActivate()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfHelp
> > >>>>>>>> Warning: ... found while parsing
':<Key>osfHelp:
> MenuHelp()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfActivate
> > >>>>>>>> Warning: ... found while parsing
':<Key>osfActivate:
> > >>>>>>>> PrimitiveParentActivate()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfActivate
> > >>>>>>>> Warning: ... found while parsing
':<Key>osfActivate:
> > >>>>>>>> DrawingAreaInput()
> > >>>>>> ManagerParentActivate()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfUp
> > >>>>>>>> Warning: ... found while parsing
':<Key>osfUp:
> DrawingAreaInput()
> > >>>>>> ManagerGadgetTraverseUp()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfSelect
> > >>>>>>>> Warning: ... found while parsing
':<Key>osfSelect:
> KeySelect()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfSelect
> > >>>>>>>> Warning: ... found while parsing
':<Key>osfSelect:
> KeySelect()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfCancel
> > >>>>>>>> Warning: ... found while parsing
'<Key>osfCancel:
> MenuEscape()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfBeginLine
> > >>>>>>>> Warning: ... found while parsing ':s
c<Key>osfBeginLine:
> > >>>>>>>> ListBeginDataExtend()'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: translation table syntax error:
Unknown keysym
> name:
> > >>>>>>>> osfBeginLine
> > >>>>>>>> Warning: ... found while parsing
':c<Key>osfBeginLine:
> > >>>>>>>> ActionGrab(SWTopLine)'
> > >>>>>>>> Warning: String to TranslationTable
conversion encountered
> errors
> > >>>>>>>> Warning: Locale not supported for
XmbTextListToTextProperty
> > >>>>>>>> Warning: Cannot convert XmString to compound
text
> > >>>>>>>> Warning: Locale not supported for
XmbTextListToTextProperty
> > >>>>>>>> Warning: Cannot convert XmString to compound
text
> > >>>>>>>> No such file: 0.172
> > >>>>>>>>
> > >>>>>>>>> Date: Sat, 19 Nov 2011 22:27:25 +0100
> > >>>>>>>>> From: t...@shelx.uni-ac.gwdg.de
> > >>>>>>>>> To: ccp4...@hotmail.com
> > >>>>>>>>> CC: CCP4BB@JISCMAIL.AC.UK
> > >>>>>>>>> Subject: Re: [ccp4bb] adxv
> > >>>>>>>>>
> > >>>>>>>>> -----BEGIN PGP SIGNED MESSAGE-----
> > >>>>>>>>> Hash: SHA1
> > >>>>>>>>>
> > >>>>>>>>> Dear Raj,
> > >>>>>>>>>
> > >>>>>>>>> your first two error messages are because
your 'current
> working
> > >>>>>>>>> directory' is not part of your bash's PATH
variable. As
> you
> > >>>>>>>>> login, type
> > >>>>>>>>> export
PATH=$PATH:/full/path/to/your/work/adxv
> > >>>>>>>>> then run adxv.
> > >>>>>>>>>
> > >>>>>>>>> I am not sure whether this will prevent the
last error to
> occur,
> > >>>>>>>>> but
> > >>>>>>>>> since you can run other graphical programs
there is a fair
> > >>>>>>>>> chance.
> > >>>>>>>>>
> > >>>>>>>>> Cheers,
> > >>>>>>>>> Tim
> > >>>>>>>>>
> > >>>>>>>>> On 11/19/2011 05:53 PM, Rajesh kumar wrote:
> > >>>>>>>>>>
> > >>>>>>>>>> Dear All,
> > >>>>>>>>>>
> > >>>>>>>>>> I have connected to unix server of the lab
through
> > >>>>>>>>>> ssh/xming/x11. I can run open
> > >>>>>> phenix and CCP4 GUI.
> > >>>>>>>>>>
> > >>>>>>>>>> I am trying to adxv to see images but I am
unable to do
> so.
> > >>>>>>>>>>
> > >>>>>>>>>> I have got two files adxv and adxv.i686FC2
sitting in my
> > >>>>>>>>>> work/adxv/.
> > >>>>>>>>>>
> > >>>>>>>>>> when i run adxv in bash
> > >>>>>>>>>> bash: adxv: command not found
> > >>>>>>>>>>
> > >>>>>>>>>>
> > >>>>>>>>>>
> > >>>>>>>>>> when i run ./adxv in bash
> > >>>>>>>>>> $ ./adxv
/home/raj/work/wen/pin8/pin8_1_001.img
> > >>>>>>>>>> (standard_in) 1: parse error
> > >>>>>>>>>> (standard_in) 1: parse error
> > >>>>>>>>>> (standard_in) 1: parse error
> > >>>>>>>>>> beam_center x = pixels , mm
> > >>>>>>>>>> beam_center y = pixels , mm
> > >>>>>>>>>> distance = mm
> > >>>>>>>>>> overload = counts
> > >>>>>>>>>> pixelsize = 0.172 mm
> > >>>>>>>>>> wavelength = Angstroem
> > >>>>>>>>>>
> > >>>>>>>>>> ./adxv: line 39: adxv.i686FC2_static:
command not found
> > >>>>>>>>>>
> > >>>>>>>>>> when i do
> > >>>>>>>>>>
> $ ./adxv.i686FC2_static
/home/raj/work/wen/pin8/pin8_1_001.img
> > >>>>>>>>>>
> > >>>>>>>>>> -X11TransSocketINETConnect() cnat get
address for
> > >>>>>>>>>> loaclhost:6011: name or service
> > >>>>>> not known
> > >>>>>>>>>> error: cannot open display
> > >>>>>>>>>>
> > >>>>>>>>>> I cant use Nxclient.
> > >>>>>>>>>>
> > >>>>>>>>>> Thanks
> > >>>>>>>>>> Raj
> > >>>>>>>>>>
> > >>>>>>>>>
> > >>>>>>>>> - --
> > >>>>>>>>> Dr Tim Gruene
> > >>>>>>>>> Institut fuer anorganische Chemie
> > >>>>>>>>> Tammannstr. 4
> > >>>>>>>>> D-37077 Goettingen
> > >>>>>>>>>
> > >>>>
> > >>>
> > >>> - --
> > >>> - --
> > >>> Dr Tim Gruene
> > >>> Institut fuer anorganische Chemie
> > >>> Tammannstr. 4
> > >>> D-37077 Goettingen
> > >>>
> > >>> GPG Key ID = A46BEE1A
> > >>>
> > >>> -----BEGIN PGP SIGNATURE-----
> > >>> Version: GnuPG v1.4.10 (GNU/Linux)
> > >>> Comment: Using GnuPG with Mozilla -
http://enigmail.mozdev.org/
> > >>>
> > >>>
iD8DBQFOy6ZnUxlJ7aRr7hoRAkD3AJ0VRmtj8Pn6RGZAX3u/PxKwiciQpQCg8W+U
> > >>> tV2tzFimkaeI8dZu0Nj1FxE=
> > >>> =EztH
> > >>> -----END PGP SIGNATURE-----
> > >>
> >
> > --
> > 0660 56 54 52 2 mobile
> > aln...@gmail.com e-mail home
> > andrzej.lyskow...@gmail.com e-mail work
>
--
