You can also try
Extensions->Modelling->Replace fragment
(usage self-explanatory)



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-----Original Message-----
> From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of
> Tim Gruene
> Sent: 19 October 2011 13:17
> To: CCP4BB@JISCMAIL.AC.UK
> Subject: Re: [ccp4bb] merging parts of models in COOT
>
> -----BEGIN PGP SIGNED MESSAGE-----
> Hash: SHA1
>
> Dear Leonid,
>
> To merge part of molecule B into molecule A you do in in steps:
> - - remove the part from A that you want to replace
> - - remove from B everything you do not want to merge with A
> - - merge B into A (Calculate->Merge...)
> - - change the newly created chain ID (Calculate->Change Chain ID...)
>
> Tim
>
> On 10/19/2011 01:20 PM, Leonid Sazanov wrote:
> > Hi,
> > If I have two somewhat different overlayed models, is it possible in
> > COOT to replace part of one model by another?
> > Similarly to O command: merge_atoms <from_molecule residue_start
> > residue_end> <to_molecule residue_start> ?
> > That's a useful feature in O, but could not find it so far in COOT.
> > Thanks!
> >
>
> - --
> - --
> Dr Tim Gruene
> Institut fuer anorganische Chemie
> Tammannstr. 4
> D-37077 Goettingen
>
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