According to the PDB Format document, entries with missing atoms should have a parsable REMARK 470. You might want to write some quick code to look for that REMARK.
The PDB staff could comment about the accuracy of REMARK 470 in its entries. Frances Bernstein ===================================================== **** Bernstein + Sons * * Information Systems Consultants **** 5 Brewster Lane, Bellport, NY 11713-2803 * * *** **** * Frances C. Bernstein * *** f...@bernstein-plus-sons.com *** * * *** 1-631-286-1339 FAX: 1-631-286-1999 ===================================================== On Tue, 23 Aug 2011, Pavel Afonine wrote:
Hi Ed, On Tue, Aug 23, 2011 at 12:39 PM, Ed Pozharski <epozh...@umaryland.edu> wrote: I would be pretty sure there is something like phinix.which_atoms_are_missing or such :) good idea! I can turn the script that I just sent into this command so it is available in a couple of days -:) Pavel.