Use ALINE sequence editor. if you multiple sequence alignment file from clustalW, you can open in ALINE software and generate publication quality of image.
http://crystal.bcs.uwa.edu.au/px/charlie/software/aline/ --- On Thu, 18/8/11, Yuri <yuri.pom...@ufl.edu> wrote: From: Yuri <yuri.pom...@ufl.edu> Subject: [ccp4bb] Sequence Alignment Question To: CCP4BB@JISCMAIL.AC.UK Date: Thursday, 18 August, 2011, 5:31 PM Hello Everyone, A little off topic but, what is a good way to show (publication quality) multiple sequence alignment? I am trying to show conserved regions in related proteins from different organisms. Thank you -- Yuri Pompeu
