Hi Rojan The tables you refer to are histograms (see the documentation and the original paper), with the first two columns defining the left and right hand side bounds of each histogram bin. The first table is a histogram of the distances between the surfaces, with the area being that associated with the surface patches associated with the inter-molecular distances within that bin. The remaining columns are cumulatives of this and percentages of the same. The second table is similar, but instead the histogram bins define the spread of the -ve dot products of the normals. The first pair of tables is for the second surface with respect to the first, these tables are then repeated for the first surface with respect to the second.
These tables are given mainly for diagnostic purposes. The final table at the end summarises the mean and median values of the histograms and their averages, and finally gives Sc. best wishes Mike Lawrence On 20/06/2011, at 11:28 AM, Rojan Shrestha wrote: > Hello, > > > > Does somebody know the meaning of output of SC? > > > > What is the meaning of From and To in “Distance between surfaces”? > > From To Area Cumulative_Area % > Cumu. % > > > > Similarly, what is the meaning of surface complementarity? > > From To Number % > > > > Does this Number indicates the residue number? > > > > Regards, > > > > Rojan > > > Mike Lawrence, PhD Associate Professor and WEHI Fellow Division of Structural Biology Walter and Eliza Hall Institute of Medical Research 1G Royal Parade, Parkville Victoria 3052, AUSTRALIA Tel. 61-3-9345-2693 Fax 61-3-9345-2686 Email: lawre...@wehi.edu.au ______________________________________________________________________ The information in this email is confidential and intended solely for the addressee. You must not disclose, forward, print or use it without the permission of the sender. ______________________________________________________________________
