Thanks everyone for your comments.  The overall opinion appears to be that 
large-scale purification of flag-tag protein is expensive.  I 100% agree and 
have thought about that plus the dilemma with the flag-tag elution difficulty 
(low pH etc) which some of you also pointed out.   So I will probably go with 
His.  Thanks everyone for keeping me frugal.

Cheers,
Christine
________________________________
From: Chun Luo [mailto:[email protected]]
Sent: Tuesday, April 19, 2011 3:18 PM
To: Harman, Christine; [email protected]
Subject: RE: [ccp4bb] Flag tag vs. his-tag

His-tag is close to neutral but flag-tag is acidic.

Using flag-tag for affinity purification usually gives cleaner protein but it 
costs a fortune due to low binding capacity of commercially available anti-flag 
resins.

--Chun

From: CCP4 bulletin board [mailto:[email protected]] On Behalf Of Harman, 
Christine
Sent: Tuesday, April 19, 2011 11:11 AM
To: [email protected]
Subject: [ccp4bb] Flag tag vs. his-tag

Hi all,
I am trying to decide between using a N-term his-tag or an N-term flag tag to 
be expressed on a protein that I will eventually want to try and crystallize.  
I usually don't cleave my tags unless absolutely necessary and I want to avoid 
double tagging.  I am leaning towards the flag since from my experience this 
tag is good for protein interactions (pulldowns), but I don't know the effects 
of a flag tag in crystallization trials.  Does anyone have experience with 
crystallizing protein with flag tags?

Thanks,

Christine

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