Easiest to follow the documentation.. http://www.ccp4.ac.uk/dist/html/dm_ncs_averaging.html
You get the matrices most easily by mapping A to B A to C etc using lsqkab if you want to average over the A molecule..
Eleanor On 12/01/2010 05:41 PM, Francis E Reyes wrote:
Hi all I'm trying to figure out rotation matricies for ncs averaging in DM. Except the conventions have got me confused. The following input script for pdbset correctly maps monomer A to monomer B. rotate - invert - -0.4654 -0.0974 -0.8797 - 0.8789 -0.1689 -0.4462 - -0.1051 -0.9808 0.1642 shift - invert - -108.0451 47.655 -17.5654 end Can someone supply me with the correct matrix to input into DM (and what convention it is?) Thanks F --------------------------------------------- Francis E. Reyes M.Sc. 215 UCB University of Colorado at Boulder gpg --keyserver pgp.mit.edu --recv-keys 67BA8D5D 8AE2 F2F4 90F7 9640 28BC 686F 78FD 6669 67BA 8D5D
