Dear Joyce, PDBsum/EBI also produces Nucplot output. You can also upload you own file for analysis.
also this might help you http://monster.northwestern.edu/ If you find any other alternatives, I am happy to hear them. HTH, Juha On 5 November 2010 21:06, Joyce <wrou...@yahoo.com> wrote: > Hi, > > I have been trying to download the program nucplot from > http://www.biochem.ucl.ac.uk/bsm/nucplot/avail.html but the files are no > longer available there. Could somebody tell me where I can download the > program, or if there is an equivalent program I could use to make a > schematic of protein-DNA interactions? Thank you, > > Joyce >
