Dear Paul! you might want to have a look at http://salilab.org/modeller/ . The stand alone version is free for academia.
Christian ___ Dr. Christian Rausch Lehrstuhl für Biologische Chemie Technische Universität München, Germany On Thu, Aug 26, 2010 at 12:03 AM, Paul Kraft <haresea...@yahoo.com> wrote: > > Hello, > I've been using an the on-line homology modeling program Jigsaw-3D, and would > like to run it on my own Linux box, but it requires CHARM, which I am > unvailable to get because I am currently looking for a faculty position... > does anyone know of an open source energy minimization program that can be > substituted for CHARM (will GROMOS from SWISS PROT work?). Also is their > any open source homology modeling program that includes solvent interactions > in the minimization (it seems they all require $$, at least the good one's). > Thanks in advance. > Paul > > Dr. Paul Kraft > Structural Biologist > cell 586-596-2770 > email: haresea...@yahoo.com > > > This communication and any attachments contain information which is > confidential and may also be privileged. It is for the exclusive use of the > intended recipient(s). If you are not the intended recipient(s) please note > that any form of disclosure, distribution, copying or use of this > communication or the information in it or in any attachments is strictly > prohibited and may be unlawful. If you have received this communication in > error, please notify the sender and delete the email and destroy any copies > of it. > > E-mail communications cannot be guaranteed to be secure or error free, as > information could be intercepted, corrupted, amended, lost, destroyed, arrive > late or incomplete, or contain viruses. We do not accept liability for any > such matters or their consequences. Anyone who communicates with us by e-mail > is taken to accept the risks in doing so.
