Hello, Just to report two bugs: When adding a link between a ligand and an amino acid with JLigand (0.1 Beta) the cif file may have the following errors (as it was my case): _chem_link_angle.linkId instead of _chem_link_angle.link_id
_chem_link_chir.linkId instead of _chem_link_chir.link_id and the data of this block may have additional (unwanted) entries. When merging such a link definition with the ligand definition using the "Merge LIBINs" tab from refmac5 (ccp4i gui, CCP4Interface 2.0.5), these two definition blocks are just omitted, without any error message (this is the bug). Best regards, Lionel