Hi all: Thanks for all kindly helps with real space CC. Now I have a new question again. In the output of OVERLAPMAP in CCP4, there is a almost last line saying "Total...":
####################################### ....... 1243 0.9528 0.9249 1244 0.9741 0.8591 1360 0.9483 0.9145 $$ Total: 0.8853 0.8676 <B><FONT COLOR="#FF0000"><!--SUMMARY_BEGIN--> OVERLAPMAP: Normal termination ######################################### Now what does the "Total" CC mean? Is it a single CC generated by integrating over the whole system? Or just an average of each individual CC values? I do need to first one, and hope that's it. Best Regards, Hailiang