Hi Lucas,

phenix.fobs_minus_fobs_map

might work for you. Example:

phenix.fobs_minus_fobs_map f_obs_1_file=data1.mtz f_obs_2_file=data2.sca f_obs_1_label=FOBS1 f_obs_2_label=FOBS2 model.pdb

where model.pdb is used as a source of phases for your map.

To be honest, I forgot how strictly I request the unit cells to be similar/identical (I would have to go and look at the code).

Try it out and let me know - I might change the code to be less restrictive, or implement an alternative approach which will be completely unit cell constants independent (but that would be a couple of days of work).

It should be available from the GUI as well.

Pavel.


On 5/3/10 3:27 PM, Yi-Liang Liu wrote:
Hi Everyone,

I've checked the previous posts about how to generate the difference map from two crystals with different cell constants. I tried MAPMAN to generate this map but I never got luck on this. It turned out to show "Maps have different cell constants" every time. Does anyone know what is the step-by-step process to generate such kind of map. Thanks.

Best,

Lucas

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