Thanks for the help everyone. I ended up finding what Kevin suggested was the 
problem. The END statement was not in the right place but before the water 
molecules.

Thanks again,


Ajit B.



----- Original Message -----
From: Kevin Jude <kj...@berkeley.edu>
Date: Friday, February 12, 2010 4:21 pm
Subject: Re: [ccp4bb] SHELXL refinement
To: CCP4BB@JISCMAIL.AC.UK


> I haven't had the good fortune of using SHELXL in a few years, but I 
> seem to
> recall that you need to make sure that you don't have an END statement
> preceding your newly added waters.  Check this after each cycle of SHELXWAT.
> 
> best wishes
> kmj
> 
> On Fri, Feb 12, 2010 at 1:45 PM, Ajit Datta <adat...@jhmi.edu> wrote:
> 
> > Hello everyone,
> >   I have one more non-CCP4 related question again. I have been 
> trying to
> > refine a structure using SHELXL at ~1.0A. I added waters using SHELXWAT,
> > however, it seems that the water molecules are not getting refined 
> in the
> > subsequent cycles. (B factor is at 50.00 for all of them). I can 
> also see
> > positive density at all the water positions with COOT.
> >   Can anyone let me know, what did I miss.
> >
> > Thanks
> >
> > Ajit B.
> >

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