As Phil realized, the leading zeros in the refmac5 version number were
the culprit that broke the original installation script. His modified
version works beautifully.
Thanks.
Andreas
On 04/01/2010 11:27, Phil Evans wrote:
The attached slightly modified script fixes that problem
Phil
On 4 Jan 2010, at 11:15, Andreas Förster wrote:
Dear all,
I downloaded ARP/wARP 7.1 from EMBL-Hamburg and executed ./install.sh. All tests pass up
to and including refmac version check (see log below). After that, a "Badly formed
number" in an if test. What could be the issue?
The system is Redhat EL 5.4, tcsh.
Thanks.
Andreas
ld-andf 133% ./install.sh
ARP/wARP installer is checking your c-shell...
c-shell is installed on your machine at /bin/csh
Your login shell is: /bin/tcsh
Checking permissions for /dev/null - OK
Checking availability of sed command - OK
Checking availability of tail command - OK
Checking availability of awk command - OK
Checking decimal separator - OK
Checking ARP/wARP directory path - OK
Checking ARP/wARP directory structure - OK
Checking java installation - installed version is "1.6.0"
Checking java version number - OK
Checking python installation - installed version is 2.4.3
Checking python version number - OK
Python executables are available in
/csb/soft/Linux/src/arp_warp_7.1/byte-code/python-2.4
Checking operating system name - Linux
Checking processor type - i686
ARP/wARP version 7.1 executables for this platform
are available in /csb/soft/Linux/src/arp_warp_7.1/bin/bin-i686-Linux
Installing script and data files for:
bin-athlon-Linux
bin-i386-Darwin
bin-i686-Linux
bin-ia64-Linux
bin-powerpc-Darwin
bin-x86_64-Linux
Checking CCP4& ARP/wARP installation - OK
Checking refmac5 installation - installed version is 5.5.0109
Checking refmac5 version number - OK
if: Badly formed number.
--
Andreas Förster, Research Associate
Paul Freemont & Xiaodong Zhang Labs
Department of Biochemistry, Imperial College London
http://www.msf.bio.ic.ac.uk
