Hi Eike,
PISA (http://www.ebi.ac.uk/msd-srv/prot_int/pistart.html) or SCOPPI (http://www.scoppi.org
) might be useful.
Interested in hearing about other alternatives.
Best wishes
Roberto
On 15 Jun 2009, at 21:28, Eike - Christian Schulz wrote:
Dear All,
I solved a structure that has a very common tertiary structure motif
but it appears as if the arrangement of the monomers is somewhat
‘non-standart’.
Of course I performed a DALI search, which resulted in a great
number of hits due to the similarity of the tertiary structure
(Z’s: 250 >8; 100 > 10).
In order to check whether this arrangement that I see is something
new I would like to perform a quaternary structure comparison. Is
there any such tool available? A Google search wasn't very
conclusive. Or is there a clever combination of available resources?
Kind regards
Eike
---
Roberto Steiner
Randall Division of Cell and Molecular Biophysics
New Hunt's House
King's College London
Guy's Campus
London, SE1 1UL
Phone +44 (0)20-7848-8216
Fax +44 (0)20-7848-6435
e-mail roberto.stei...@kcl.ac.uk
