I had the same problem. In my case I think it was related to the part of ccp4 configuration that redefines python path. For some reasons (it breaks wxPython, at least in Hardy), I had it commented out and then after starting ccp4i I got these dbccp4i warnings. When I turned python part of ccp4 configuration script back on I got the same messages as Jan does - ccp4i window opens and then closes.
What solved the problem for me was to delete the whole .CCP4 folder (it may be enough just to get rid of unix subfolder). Since it was fresh Hardy installation on a new machine, I didn't lose anything. HTH, Ed. On Wed, 2009-03-04 at 17:02 +0000, Stein, ND (Norman) wrote: > Hi Jan > > If they exist, could you please send me any of the .log files in the > following directory: > > ~/.CCP4/ > > In particular the file dbhandler.log. These should help to fix the > problem. > > Thanks > > Norman Stein > CCP4 > > > -----Original Message----- > From: CCP4 bulletin board [mailto:ccp...@jiscmail.ac.uk] On Behalf Of > Jan Jensen > Sent: 03 March 2009 17:43 > To: CCP4BB@JISCMAIL.AC.UK > Subject: [ccp4bb] Problem with setting up ccp4 gui > > Hi all, > I have been struggling with installing the new CCP4 package. I run > RedHat Enterprise 4 and have previously used older packages with > success. After I untar and run ./install as root everything seems to > install just fine. When I run ccp4i -c to configure I think something > goes wrong or extensions get misdirected. If I try to run all the > scripts to test, they all seem to execute fine. > I have had luck starting the GUI as root or user but when you get to the > part where projekt directories are setup the GUI stops working and > cannot be restarted (showing the message below) > > Error in startup script: wrong # args: should be "dbccp4i_open_project > project args" > while executing > "dbccp4i_open_project" > ("eval" body line 1) > invoked from within > "eval dbccp4i_open_project $project $args" > (procedure "DbLoadFile" line 12) > invoked from within > "DbLoadFile $project" > (procedure "DbOpenDatabase" line 13) > invoked from within > "DbOpenDatabase $project" > (procedure "DbOpen" line 30) > invoked from within > "DbOpen -init" > (procedure "DbInitialise" line 19) > invoked from within > "DbInitialise" > (procedure "task" line 14) > invoked from within > "task" > ("configure" arm line 6) > invoked from within > "switch $system(RUN_MODE) \ > script { > # Run a script ($CCP4I/scripts/project.script) with parameters from def > file > > source [file join $env(CCP4I_..." > (file "/opt/ccp4/ccp4-6.1.0/ccp4i/bin/ccp4i.tcl" line 163) > invoked from within > "source [file join $env(CCP4I_TOP) bin ccp4i.tcl]" > (file "/opt/ccp4/ccp4-6.1.0/ccp4i/bin/ccp4i" line 5) > > > Can anyone help me? > > Thanks, > > Jan K Jensen, Pl-R, Ph.D. > Post doctoral fellow at University of Illinois at Chicago (UIC) > Laboratory of Peter GW Gettins Department of Biochemistry and Molecular > Genetics MBRB Room 1260 900 S Ashland Chicago Il, 60607 > Phone: 312 996 7664 or 773 574 9276 (mobile) > Email: j...@uic.edu > Homepage: http://www.epernicus.com/jkj > > > -----Original Message----- > From: CCP4 bulletin board [mailto:ccp...@jiscmail.ac.uk] On Behalf Of > Nadir T. Mrabet > Sent: Monday, February 16, 2009 12:37 PM > To: CCP4BB@JISCMAIL.AC.UK > Subject: Re: [ccp4bb] PDB protein strucutrues as screen saver > > > Hi, > You may want to have a look at > http://www.luminorum.com/html/luminorum_ltd___extras.html. > hth > Nadir > > -- > > Pr. Nadir T. Mrabet > Cellular & Molecular Biochemistry > INSERM U-724 > Nancy University, School of Medicine > 9, Avenue de la Foret de Haye, BP 184 > 54505 Vandoeuvre-les-Nancy Cedex > France > Phone: +33 (0)3.83.68.32.73 > Fax: +33 (0)3.83.68.32.79 > E-mail: nadir.mra...@medecine.uhp-nancy.fr > > > > Jayashankar wrote: > > Dear Scientists, > > > > It may be too much... > > > > But as a biophysics student I would like to appreciate and feel happy > > to have pdb structures as my computers screen savers than to have some > > > funny and fancy stuffs. > > And it may help me as a motivator to solve my own structures in > future.... > > > > I want to ask is there any existing script that grep strucutres one by > > > one with one line definition of that structure. > > > > > > > > > > S.Jayashankar > > Research Student > > Institute for Biophysical Chemistry > > Hannover Medical School > > Germany. -- Edwin Pozharski, PhD, Assistant Professor University of Maryland, Baltimore ---------------------------------------------- When the Way is forgotten duty and justice appear; Then knowledge and wisdom are born along with hypocrisy. When harmonious relationships dissolve then respect and devotion arise; When a nation falls to chaos then loyalty and patriotism are born. ------------------------------ / Lao Tse /
